| Apr 20, 2020 |
BCAM0926
|
Burkholderia cenocepacia
J2315 |
New product name: RND-8 efflux system transporter protein. New product name confidence: Class 1. New comment: Member of rnd-8 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-8; Major RND-8 substrate is tobramycin (in biofilm grown cells). New PMIDs: 25267676, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAM0927
|
Burkholderia cenocepacia
J2315 |
New product name: RND-8 efflux system outer membrane protein. New product name confidence: Class 1. New comment: Member of rnd-8 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-8; Major RND-8 substrate is tobramycin (in biofilm grown cells). New PMIDs: 25267676, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAM0925
|
Burkholderia cenocepacia
J2315 |
New product name: RND-8 efflux system membrane fusion protein. New product name confidence: Class 1. New comment: Member of rnd-8 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-8; Major RND-8 substrate is tobramycin (in biofilm grown cells). New PMIDs: 25267676, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAL2821
|
Burkholderia cenocepacia
J2315 |
New product name: RND-4 efflux system transporter protein. New product name confidence: Class 1. New comment: Member of rnd-4 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-4; Major RND-4 substrates are aztreonam, chloramphenicol, fluoroquinolones, tobramycin. New PMIDs: 19761586, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAL2820
|
Burkholderia cenocepacia
J2315 |
New product name: RND-4 efflux system outer membrane protein. New product name confidence: Class 1. New comment: Member of rnd-4 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-4; Major RND-4 substrates are aztreonam, chloramphenicol, fluoroquinolones, tobramycin. New PMIDs: 19761586, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAL2822
|
Burkholderia cenocepacia
J2315 |
New product name: RND-4 efflux system membrane fusion protein. New product name confidence: Class 1. New comment: Member of rnd-4 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-4; Major RND-4 substrates are aztreonam, chloramphenicol, fluoroquinolones, tobramycin. New PMIDs: 19761586, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAL1675
|
Burkholderia cenocepacia
J2315 |
New product name: RND-3 efflux system transporter protein. New product name confidence: Class 1. New comment: Member of rnd-3 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-3; ; Major RND-3 substrates are nalidixic acid, ciprofloxacin, tobramycin, chlorhexidine. New PMIDs: 19761586, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAL1676
|
Burkholderia cenocepacia
J2315 |
New product name: RND-3 efflux system outer membrane protein. New product name confidence: Class 1. New comment: Member of rnd-3 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-3; ; Major RND-3 substrates are nalidixic acid, ciprofloxacin, tobramycin, chlorhexidine. New PMIDs: 19761586, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAL1674
|
Burkholderia cenocepacia
J2315 |
New product name: RND-3 efflux system membrane fusion protein. New product name confidence: Class 1. New comment: Member of rnd-3 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-3; ; Major RND-3 substrates are nalidixic acid, ciprofloxacin, tobramycin, chlorhexidine. New PMIDs: 19761586, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAS0592
|
Burkholderia cenocepacia
J2315 |
New product name: RND-1 efflux system transporter protein. New product name confidence: Class 1. New comment: Member of rnd-1 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-1. New PMIDs: 19761586, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAS0593
|
Burkholderia cenocepacia
J2315 |
New product name: RND-1 efflux system outer membrane protein. New product name confidence: Class 1. New comment: Member of rnd-1 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-1. New PMIDs: 19761586, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAS0591
|
Burkholderia cenocepacia
J2315 |
New product name: RND-1 efflux system membrane fusion protein. New product name confidence: Class 1. New comment: Member of rnd-1 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-1. New PMIDs: 19761586, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0131
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: Rhs-2. New gene name: rhs-2. New pathway: T6SS-2 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BPSS1524
|
Burkholderia pseudomallei
K96243 |
New product name: putative Type III secretion system effector protein. New product name confidence: Class 2. New GO Accession: GO:0030254(IDA). New PubMed reference: 16164564.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BPSS1523
|
Burkholderia pseudomallei
K96243 |
New product name: putative Type III secretion system chaperone protein. New product name confidence: Class 2. New GO Accession: GO:0030254(IDA). New PubMed reference: 16164564.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
bglu_1g00490
|
Burkholderia glumae
BGR1 |
New product name: PidS. New gene name: pidS. New product name confidence: Class 1. New PubMed reference: 22364153.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
bglu_1g00500
|
Burkholderia glumae
BGR1 |
New product name: PidR. New gene name: pidR. New product name confidence: Class 1. New PubMed reference: 22364153.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL2408
|
Burkholderia cenocepacia
J2315 |
New product name: MsbA. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO Accession: GO:0009244(IGC). New PubMed reference: 19525227.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAM2552
|
Burkholderia cenocepacia
J2315 |
New product name: LlpE. New product name confidence: Class 3. New PubMed reference: 15837391.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BPSS0485
|
Burkholderia pseudomallei
K96243 |
New product name: HhqE. New gene name: hhqE. New pathway: 2-heptyl-4(1H)-quinolone biosynthesis. New PubMed reference: 16873018.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BPSS0484
|
Burkholderia pseudomallei
K96243 |
New product name: HhqD. New gene name: hhqD. New pathway: 2-heptyl-4(1H)-quinolone biosynthesis. New PubMed reference: 16873018.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BPSS0483
|
Burkholderia pseudomallei
K96243 |
New product name: HhqC. New gene name: hhqC. New pathway: 2-heptyl-4(1H)-quinolone biosynthesis. New PubMed reference: 16873018.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BPSS0482
|
Burkholderia pseudomallei
K96243 |
New product name: HhqB. New gene name: hhqB. New pathway: 2-heptyl-4(1H)-quinolone biosynthesis. New PubMed reference: 16873018.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BPSS0481
|
Burkholderia pseudomallei
K96243 |
New product name: HhqA. New gene name: hhqA. New pathway: 2-heptyl-4(1H)-quinolone biosynthesis. New PubMed reference: 16873018.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAL1538
|
Burkholderia cenocepacia
J2315 |
New product name: Hfq2. New gene name: hfq2. New product name confidence: Class 1. New GO Accession: GO:0006979(IPI). New GO Accession: GO:0003723(EXP). New GO Accession: GO:0003677(). New PubMed reference: 21278292. New PubMed reference: 19942656. New PubMed reference: 23142676.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAL1879
|
Burkholderia cenocepacia
J2315 |
New product name: Hfq. New product name confidence: Class 1. New GO Accession: GO:0006979(IPI). New GO Accession: GO:0003723(EXP). New PubMed reference: 21278292. New PubMed reference: 19942656. New PubMed reference: 23142676.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0868
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: Hcp-5. New gene name: hcp-5. New pathway: T6SS-5 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II1899
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: Hcp-4. New gene name: hcp-4. New pathway: T6SS-4 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0123
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: Hcp-2. New gene name: hcp-2. New pathway: T6SS-2 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_I2962
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: hcp-1. New gene name: hcp-1. New pathway: T6SS-1 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 1 (T6SS-1).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL2248
|
Burkholderia cenocepacia
J2315 |
New product name: Group I Sfp-type phosphopantetheinyl transferase, PobA. New gene name: pobA. New product name confidence: Class 1. New pathway: pyochelin and ornibactin biosynthesis. New GO Accession: GO:0033212(IMP). New PubMed reference: 20966087.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL2409
|
Burkholderia cenocepacia
J2315 |
New product name: DnaE. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO Accession: GO:0009244(IGC). New PubMed reference: 19525227.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAM1349
|
Burkholderia cenocepacia
J2315 |
New product name: CRP/FNR family transcriptional regulator. New product name confidence: Class 1. New GO Accession: GO:1900192(IMP). New GO Accession: GO:2001008(IMP). New GO Accession: GO:0009297(IMP). New PubMed reference: 21883527. New PubMed reference: 23281338.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAM0224
|
Burkholderia cenocepacia
J2315 |
New product name: collagen-binding trimeric autotransporter adhesin. New GO Accession: GO:0007160(IMP). New PubMed reference: 22848588. New PubMed reference: 20019083. New genomic context: TAA gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0864
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: ClpV-5. New gene name: clpV-5. New pathway: T6SS-5 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II1895
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: ClpV-4. New gene name: clpV-4. New pathway: T6SS-4 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0140
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: ClpV-2. New gene name: clpV-2. New pathway: T6SS-2 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_I2958
|
Burkholderia thailandensis
E264 ATCC 700388 |
New product name: clpV-1. New gene name: clpV-1. New pathway: T6SS-1 Type VI Secretion System. New GO Accession: GO:0033103(IGC). New PubMed reference: 20865170. New genomic context: type VI secretion system gene cluster 1 (T6SS-1).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 20, 2020 |
BP1026B_II1037
|
Burkholderia pseudomallei
1026b |
New product name: class A beta-lactamase, PenA. New product name confidence: Class 1. New comment: B. multivorans PenA is an inhibitor-resistant carbapenemase, whereas the B. pseudomallei PenA is an extended spectrum beta-lactamase (PMID:27620956). New PMID: 1718214.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAM0580
|
Burkholderia cenocepacia
J2315 |
New product name: Cis-2-dodecenoic acid receptor RpfR. New gene name: rpfR. New product name confidence: Class 1. New GO Accession: GO:0071111(IMP). New PubMed reference: 22949660.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAM0189
|
Burkholderia cenocepacia
J2315 |
New product name: CepS. New gene name: cepS. New GO Accession: GO:0045893(IMP). New PubMed reference: 23136852.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAM0188
|
Burkholderia cenocepacia
J2315 |
New product name: CepR2. New gene name: cepR2. New comment : CepR2 functions as an antiactivator of CepS.. New GO Accession: GO:0052100(IMP). New GO Accession: GO:1900706(IMP). New GO Accession: GO:0043433(IMP). New PubMed reference: 23136852.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BPSS1516
|
Burkholderia pseudomallei
K96243 |
New product name: BopC. New gene name: bopC. New product name confidence: Class 1. New subcellular localization: Extracellular. New subcellular localization confidence: Class 1. New GO Accession: GO:0030254(IDA). New PubMed reference: 22092682.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BPSS1517
|
Burkholderia pseudomallei
K96243 |
New product name: BopB. New gene name: bopB. New product name confidence: Class 2. New GO Accession: GO:0030254(IDA). New PubMed reference: 16164564.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAM0581
|
Burkholderia cenocepacia
J2315 |
New product name: bifunctional crotonase homologue. New product name confidence: Class 1. New GO Accession: GO:0016297(IDA). New GO Accession: GO:0016836(IDA). New PubMed reference: 22949660. New PubMed reference: 18049456. New PubMed reference: 22221091.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAL0343
|
Burkholderia cenocepacia
J2315 |
New product name: BcsL. New gene name: bcsL. New synonym for gene: bcsLB. New synonym for CDS: BcsLB. New GO Accession: GO:0033103(IGC). New PubMed reference: 20729192.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAL0342
|
Burkholderia cenocepacia
J2315 |
New product name: BcsK. New gene name: bcsK. New product name confidence: Class 1. New synonym for gene: bcsKC. New synonym for CDS: BcsKC. 0 New GO Accession: GO:0033103(IMP). New PubMed reference: 20729192. New subcellular localization: Outer Membrane (Class 1).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAM0184
|
Burkholderia cenocepacia
J2315 |
New product name: BclB. New gene name: bclB. New product name confidence: Class 1. New subcellular localization: Outer Membrane. New subcellular localization confidence: Class 1. New GO Accession: GO:0044010(IMP). New PubMed reference: 22950027. New genomic context: bclACB operon.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAM2143
|
Burkholderia cenocepacia
J2315 |
New product name: BapA. New gene name: bapA. New product name confidence: Class 1. New synonym for gene: adhA. New synonym for CDS: AdhA. New subcellular localization: Outer Membrane. New subcellular localization confidence: Class 1. New GO Accession: GO:0044010(IMP). New PubMed reference: 23185499. New PubMed reference: 16313619. New PubMed reference: 22950027.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAS0201
|
Burkholderia cenocepacia
J2315 |
New product name: AfcF. New gene name: afcF. New product name confidence: Class 1. New GO Accession: GO:0071978(IMP). New GO Accession: GO:0044010(IMP). New GO Accession: GO:0006629(IMP). New PubMed reference: 23306671. New PubMed reference: 21690240.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAS0208
|
Burkholderia cenocepacia
J2315 |
New product name: AfcE. New gene name: afcE. New product name confidence: Class 1. New GO Accession: GO:0071978(IMP). New GO Accession: GO:0044010(IMP). New GO Accession: GO:0006629(IMP). New PubMed reference: 23306671. New PubMed reference: 21690240.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAM2550
|
Burkholderia cenocepacia
J2315 |
New product name synonym: RND-10 efflux system transporter protein. New product name confidence: Class 1. New comment: Member of ceoAB-opcM (rnd-10) operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump (RND-10); Major substrates of RND-10 are chloramphenicol, flouroquinolones and trimethoprim. New PMIDs: 14755343, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAM2449
|
Burkholderia cenocepacia
J2315 |
New product name synonym: RND-10 efflux system outer membrane protein. New product name confidence: Class 1. New comment: Member of ceoAB-opcM (rnd-10) operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump (RND-10); Major substrates of RND-10 are chloramphenicol, flouroquinolones and trimethoprim. New PMIDs: 14755343, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAM2551
|
Burkholderia cenocepacia
J2315 |
New product name synonym: RND-10 efflux system membrane fusion protein. New product name confidence: Class 1. New comment: Member of ceoAB-opcM (rnd-10) operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump (RND-10); Major substrates of RND-10 are chloramphenicol, flouroquinolones and trimethoprim. New PMIDs: 14755343, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAL0323
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New comment: Required for growth in the presence of 20__M CuSO4 (PMID:32090500). New PMID: 32090500.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
I35_RS01625
|
Burkholderia cenocepacia
H111 |
New product name confidence: Class 2. New comment: Required for growth in the presence of 20__M CuSO4 (PMID:32090500). New PMID: 32090500.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
Bcep1808_5793
|
Burkholderia vietnamiensis
G4 |
New product name confidence: Class 2. New pathway: VirB4/D4 Type IV Secretion System. New GO Accession: GO:0030255(ISS). New PubMed reference: 15342570. New PubMed reference: 19744991. New PubMed reference: 18824538.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
Bxe_C0458
|
Burkholderia xenovorans
LB400 |
New product name confidence: Class 2. New pathway: VirB4/D4 Type IV Secretion System. New GO Accession: GO:0030255(ISS). New PubMed reference: 15342570. New PubMed reference: 19744991. New PubMed reference: 18824538.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL3515
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(ISS). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL3524
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IGC). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM0393
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New pathway: beta-Lactam resistance. New EC Number: 3.5.2.6. New GO Accession: GO:0008800(ISS). New PubMed reference: 9333046. New PubMed reference: 18931103.
|
Literature review of BRENDA website by Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAS0156
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New pathway: beta-Lactam resistance. New EC Number: 3.5.2.6. New GO Accession: GO:0008800(ISS). New PubMed reference: 14982755. New PubMed reference: 18931103.
|
Literature review of BRENDA website by Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM1779
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New pathway: beta-Lactam resistance. New EC Number: 3.5.2.6. New GO Accession: GO:0008800(ISS). New PubMed reference: 12821450. New PubMed reference: 18931103.
|
Literature review of BRENDA website by Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2165
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New pathway: beta-Lactam resistance. New GO Accession: GO:0008800(ISS). New PubMed reference: 19075063. New PubMed reference: 9371340. New PubMed reference: 18931103.
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Literature review of BRENDA website by Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAM2141
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New GO Accession: GO:0044010(IMP). New PubMed reference: 22950027.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAM2142
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New GO Accession: GO:0044010(IMP). New PubMed reference: 22950027.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAM2140
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New GO Accession: GO:0044010(IGC). New PubMed reference: 22950027.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2230
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New comment : The ability of J2315 to produce pyochelin is compromised since the pyochelin biosynthesis gene pchF (BCAM2228) contains a frameshift mutation. Genes encoding transport and utilization of pyochelin in J2315 are intact and therefore probably functional.. New GO Accession: GO:0033212(ISS). New PubMed reference: 9846750. New PubMed reference: 18931103.
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Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
Bxe_A1420
|
Burkholderia xenovorans
LB400 |
New product name confidence: Class 2. New comment : Expressed as a hexa-histidine-tagged fusion in Escherichia coli BL21 Star (DE3). ALDHC in complex with NADPH bound in the cofactor binding pocket and an ordered fragment of a polyethylene glycol molecule bound in the substrate tunnel, to 1.6 A resolution. Belongs to space group P1. The ALDHC monomer comprises three distinct domains, an N-terminal cofactor (NAD/P+)-binding domain, a catalytic domain, and an oligomerization domain. New EC Number: 1.2.1.5. New GO Accession: GO:0004030(IDA). New PubMed reference: 18462753.
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Literature review of BRENDA website by Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL2829
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New subcellular localization: Periplasmic. New subcellular localization confidence: Class 1. New EC Number: 3.4.21.107. New PubMed reference: 17220310.
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Literature review of BRENDA website by Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL2643
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New subcellular localization: Periplasmic. New subcellular localization confidence: Class 1. New EC Number: 1.15.1.1. New GO Accession: GO:0004784(IDA). New PubMed reference: 17325048.
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Literature review of BRENDA website by Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
Bcen_4843
|
|
New product name confidence: Class 1. New pathway: VirB4/D4 Type IV Secretion System. New GO Accession: GO:0030255(IMP). New PubMed reference: 15342570. New PubMed reference: 19744991. New PubMed reference: 18824538.
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Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
Bcen2424_3323
|
|
New product name confidence: Class 1. New pathway: VirB4/D4 Type IV Secretion System. New GO Accession: GO:0030255(IMP). New PubMed reference: 15342570. New PubMed reference: 19744991. New PubMed reference: 18824538.
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Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
Bcenmc03_4192
|
Burkholderia cenocepacia
MC0-3 |
New product name confidence: Class 1. New pathway: VirB4/D4 Type IV Secretion System. New GO Accession: GO:0030255(IMP). New PubMed reference: 15342570. New PubMed reference: 19744991. New PubMed reference: 18824538.
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Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BPSL0018
|
Burkholderia pseudomallei
K96243 |
New product name confidence: Class 1. New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IMP). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BURPS1106A_0010
|
Burkholderia pseudomallei
1106a |
New product name confidence: Class 1. New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IMP). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BURPS1106A_0019
|
Burkholderia pseudomallei
1106a |
New product name confidence: Class 1. New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IMP). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BURPS668_0010
|
Burkholderia pseudomallei
668 |
New product name confidence: Class 1. New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IMP). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BURPS668_0019
|
Burkholderia pseudomallei
668 |
New product name confidence: Class 1. New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IMP). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BURPS1710b_0223
|
Burkholderia pseudomallei
1710b |
New product name confidence: Class 1. New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IMP). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BPSL0010
|
Burkholderia pseudomallei
K96243 |
New product name confidence: Class 1. New pathway: Type II secretion system (T2SS). New pathway: General secretory pathway. New GO Accession: GO:0015628(IMP). New PubMed reference: 10419967.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1688
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New pathway: ornibactin biosynthesis and transport. New GO Accession: GO:0033212(IMP). New PubMed reference: 16672617. New genomic context: ornibactin gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL3110
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New pathway: lipopolysaccharide core region biosynthesis. New GO Accession: GO:0009244(IMP). New PubMed reference: 19525227.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL3112
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New pathway: lipopolysaccharide core region biosynthesis. New GO Accession: GO:0009244(IMP). New PubMed reference: 19525227.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL2945
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New pathway: ADP-L-glycero-D-manno-heptose synthesis pathway. New GO Accession: GO:0009244(IMP). New PubMed reference: 16513737. New genomic context: hld gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL0967
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO Accession: GO:0009244(IMP). New PubMed reference: 19525227. New PubMed reference: 10543742.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL2942
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO Accession: GO:0009244(IMP). New PubMed reference: 16513737. New genomic context: hld gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL2946
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New EC Number: 1.1.1.22. New GO Accession: GO:0009244(IMP). New GO Accession: GO:0003979(IMP). New PubMed reference: 16513737. New PubMed reference: 19383677. New genomic context: hld gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2107
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New EC Number: 1.11.1.6;1.11.1.7. New GO Accession: GO:0004096(IDA). New GO Accession: GO:0004601(IDA). New PubMed reference: 17371508.
|
Literature review of BRENDA website by Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BPSL2865
|
Burkholderia pseudomallei
K96243 |
New product name confidence: Class 1. New EC Number: 1.11.1.6;1.11.1.7. New GO Accession: GO:0004096(IDA). New GO Accession: GO:0004601(IDA). New PubMed reference: 12832453.
|
Literature review of BRENDA website by Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BURPS668_3322
|
Burkholderia pseudomallei
668 |
New product name confidence: Class 1. New EC Number: 1.11.1.6;1.11.1.7. New GO Accession: GO:0004096(IDA). New GO Accession: GO:0004601(IDA). New PubMed reference: 12832453.
|
Literature review of BRENDA website by Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BURPS1710b_3366
|
Burkholderia pseudomallei
1710b |
New product name confidence: Class 1. New EC Number: 1.11.1.6;1.11.1.7. New GO Accession: GO:0004096(IDA). New GO Accession: GO:0004601(IDA). New PubMed reference: 12832453.
|
Literature review of BRENDA website by Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BURPS1106A_3356
|
Burkholderia pseudomallei
1106a |
New product name confidence: Class 1. New EC Number: 1.11.1.6;1.11.1.7. New GO Accession: GO:0004096(IDA). New GO Accession: GO:0004601(IDA). New PubMed reference: 12832453.
|
Literature review of BRENDA website by Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL3117
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New comment : IS402 insertion sequence located between wbxD and wxbF disrupts O-antigen biosynthesis. O-antigen production can be reconstituted by expressing a functional wbxE.. New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO Accession: GO:0009243(IMP). New PubMed reference: 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAS0293
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New comment : AidA is essential for slow killing of C. elegans but has little effect on fast killing. New subcellular localization: Cytoplasmic. New subcellular localization confidence: Class 1. New PubMed reference: 15978077. New PubMed reference: 15557647. New PubMed reference: 19761612.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAS0208
|
Burkholderia cenocepacia
J2315 |
New PMID: 30513124.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAS0225
|
Burkholderia cenocepacia
J2315 |
New PMID: 30513124.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
QU43_RS64696
|
Burkholderia cenocepacia
J2315 |
New PMID: 29359187.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
Bcen_4854
|
|
New pathway: VirB4/D4 Type IV Secretion System. New GO Accession: GO:0030255(IGC). New PubMed reference: 15342570. New PubMed reference: 19744991. New PubMed reference: 18824538.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
Bcen_4853
|
|
New pathway: VirB4/D4 Type IV Secretion System. New GO Accession: GO:0030255(IGC). New PubMed reference: 15342570. New PubMed reference: 19744991. New PubMed reference: 18824538.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|