Strain |
Burkholderia cenocepacia J2315
GCF_000009485.1|latest |
Locus Tag |
BCAL1538
|
NCBI Locus Tag | QU43_RS44200 |
Name |
hfq2
|
Replicon | chromosome 1 |
Genomic location | 1704035 - 1704601 (- strand) |
RefSeq | WP_012492570.1 |
GI | 206559904 |
Entrez | 6931813 |
GI | 206559904 |
INSDC | CAR51837.1 |
NCBI Locus Tag | QU43_RS44200 |
NCBI Old Locus Tag | BCAL1538 |
RefSeq | WP_012492570.1,GeneID |
UniParc | UPI00017B948F |
UniProtKB Acc | B4E834 |
UniProtKB ID | B4E834_BURCJ |
UniRef100 | UniRef100_B4E834 |
UniRef50 | UniRef50_Q140R2 |
UniRef90 | UniRef90_B4E834 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
Hfq2
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | 8.68 |
Kyte-Doolittle Hydrophobicity Value | -1.115 |
Molecular Weight (kDa) | 20116.9 |
Isoelectric Point (pI) | 10.24 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 272 genera
|
Burkholderia Ortholog Group |
BG001358 (652 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: BCAL1538
Search term: hfq2
Search term: Hfq2
|
The second RNA chaperone, Hfq2, is also required for survival under stress and full virulence of Burkholderia cenocepacia J2315.
Ramos CG, Sousa SA, Grilo AM, Feliciano JR, Leitão JH
J Bacteriol 2011 Apr;193(7):1515-26
PubMed ID: 21278292
|
The hfq gene is required for stress resistance and full virulence of Burkholderia cepacia to the nematode Caenorhabditis elegans.
Sousa SA, Ramos CG, Moreira LM, Leitão JH
Microbiology 2010 Mar;156(Pt 3):896-908
PubMed ID: 19942656
|
Experimental identification of small non-coding regulatory RNAs in the opportunistic human pathogen Burkholderia cenocepacia J2315.
Ramos CG, Grilo AM, da Costa PJ, Leitão JH
Genomics 2013 Feb;101(2):139-48
PubMed ID: 23142676
|