Burkholderia glumae BGR1, bglu_1g00500 (pidR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia glumae BGR1
GCF_000022645.2|latest
Locus Tag
bglu_1g00500
NCBI Locus TagBGLU_RS00235
Name
pidR
Replicon chromosome 1
Genomic location 53089 - 53781 (- strand)

Cross-References

RefSeq WP_012734156.1
GI 238025728
Entrez 7905469
GI 238025728
INSDC ACR27255.1
NCBI Locus Tag BGLU_RS00235
NCBI Old Locus Tag bglu_1g00500
RefSeq WP_012734156.1,GeneID
UniParc UPI0001A4B14E
UniProtKB Acc C5A846
UniProtKB ID C5A846_BURGB
UniRef100 UniRef100_A0A095FHH4
UniRef50 UniRef50_Q0K5I4
UniRef90 UniRef90_Q2STB8

Product

Feature Type CDS
Coding Frame 1
Product Name
PidR
Product Name Confidence: Class 1
Synonyms
Evidence for Translation
Charge (pH 7) -1.10
Kyte-Doolittle Hydrophobicity Value -0.247
Molecular Weight (kDa) 25943.6
Isoelectric Point (pI) 6.73

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 619 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG000061 (654 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: bglu_1g00500
Search term: pidR
Search term: PidR

Human Homologs

References

A conserved two-component regulatory system, PidS/PidR, globally regulates pigmentation and virulence-related phenotypes of Burkholderia glumae.
Karki HS, Barphagha IK, Ham JH
Mol Plant Pathol 2012 Sep;13(7):785-94
PubMed ID: 22364153