Strain |
Burkholderia cenocepacia J2315
GCF_000009485.1|latest |
Locus Tag |
BCAL2643
|
NCBI Locus Tag | QU43_RS49830 |
Name |
sodC
|
Replicon | chromosome 1 |
Genomic location | 2909310 - 2909846 (- strand) |
RefSeq | WP_006493653.1 |
GI | 206560982 |
Entrez | 6933494 |
GI | 206560982 |
INSDC | CAR52945.1 |
NCBI Locus Tag | QU43_RS49830 |
NCBI Old Locus Tag | BCAL2643 |
RefSeq | WP_006493653.1,GeneID |
UniParc | UPI00017B9722 |
UniProtKB Acc | B4E8D7 |
UniProtKB ID | B4E8D7_BURCJ |
UniRef100 | UniRef100_B4E8D7 |
UniRef50 | UniRef50_A1V5V6 |
UniRef90 | UniRef90_B4E8D7 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
superoxide dismutase SodC
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | 3.82 |
Kyte-Doolittle Hydrophobicity Value | -0.088 |
Molecular Weight (kDa) | 18124.1 |
Isoelectric Point (pI) | 8.54 |
Individual Mappings | |
Additional evidence for subcellular localization |
Source 1 | |
Database | BGD |
Category | Response to superoxide |
Evidence |
ECO:0000250
sequence similarity evidence used in manual assertion
|
Host Organism | Mus musculus |
Notes | sodC mutation in K56-2 is attenuated for virulence in RAW 264.7 macrophages |
Reference | 17325048 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 88 genera
|
Burkholderia Ortholog Group |
BG002305 (654 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: BCAL2643
Search term: sodC
Search term: superoxide dismutase SodC
|
Ensembl
97, assembly
GRCh38.p12
|
superoxide dismutase 1 [Source:HGNC Symbol;Acc:HGNC:11179]
E-value:
1.4e-05
Percent Identity:
34.8
|
Characterization of SodC, a periplasmic superoxide dismutase from Burkholderia cenocepacia.
Keith KE, Valvano MA
Infect Immun 2007 May;75(5):2451-60
PubMed ID: 17325048
|