| Apr 30, 2018 |
BCAM0326
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New PubMed ID: 15342570. New PubMed ID: 19744991. New comment: This gene is part of the B. cenocepacia J2315 VirB-VirD-like type IV secretion system cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BMA10229_2088
|
Burkholderia mallei
NCTC 10229 |
New gene name: bprC. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1520.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSL2100
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSS0908
|
Burkholderia pseudomallei
K96243 |
New gene name: bpaE. New product name: BpaE. New product name confidence: Class 1. New PubMed ID: 23716608.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BTH_I1470
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: rmlA. New product name: glucose-1-phosphate thymidylyltransferase RmlA. New product name confidence: Class 1. New PubMed ID: 21640586. New comment: Belongs to the Type II O-antigenic polysaccharide biosynthesis gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS1825
|
Burkholderia pseudomallei
K96243 |
New gene name: bceK. New product name: BceK. New product name confidence: Class 2. New PubMed ID: 19948863. New PubMed ID: 22919582. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4210.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0525
|
Burkholderia pseudomallei
K96243 |
New gene name: tagAB-4. New product name: type VI secretion system-associated protein TagAB-4. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-4 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-2 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAM0327
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New PubMed ID: 15342570. New PubMed ID: 19744991. New comment: This gene is part of the B. cenocepacia J2315 VirB-VirD-like type IV secretion system cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BMAA1517
|
|
New gene name: bprC. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1520.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSL2127
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BTH_I1469
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: rmlB. New product name: dTDP-d-glucose 4,6-dehydratase RmlB. New product name confidence: Class 1. New PubMed ID: 21640586. New comment: Belongs to the Type II O-antigenic polysaccharide biosynthesis gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BTH_II0552
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: bceK. New product name: BceK. New product name confidence: Class 2. New PubMed ID: 19948863. New PubMed ID: 22919582. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4210.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0526
|
Burkholderia pseudomallei
K96243 |
New gene name: tabB-4. New product name: type VI secretion system-associated protein TagB-4. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-4 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-2 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAM0328
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New PubMed ID: 15342570. New PubMed ID: 19744991. New comment: This gene is part of the B. cenocepacia J2315 VirB-VirD-like type IV secretion system cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BTH_II0851
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: bprB. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1522.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSL2129
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSL2237
|
Burkholderia pseudomallei
K96243 |
New gene name: batA. New product name: Burkholderia autotransporter A, BatA. New product name confidence: Class 1. New PubMed ID: 25830295.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
CH72_RS04090
|
Burkholderia ambifaria
AMMD |
New gene name: kdoO. New product name: Kdo 3-hydroxylase KdoO. New product name confidence: Class 1. New PubMed ID: 21178073. New PubMed ID: 25204504. New comment: Responsible for Ko formation with Kdo2-lipid A as a substrate
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
bglu_2g16440
|
Burkholderia glumae
BGR1 |
New gene name: bceK. New product name: BceK. New product name confidence: Class 2. New PubMed ID: 19948863. New PubMed ID: 22919582. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4210.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0527
|
Burkholderia pseudomallei
K96243 |
New gene name: tagC-4. New product name: type VI secretion system-associated protein TagC-4. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-4 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-2 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAM0329
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New PubMed ID: 15342570. New PubMed ID: 19744991. New comment: This gene is part of the B. cenocepacia J2315 VirB-VirD-like type IV secretion system cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSS1522
|
Burkholderia pseudomallei
K96243 |
New gene name: bprB. New product name confidence: Class 1. New PubMed ID: 20951592.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSL2140
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSL2063
|
Burkholderia pseudomallei
K96243 |
New gene name: bpaB. New product name: putative trimeric autoransporter, BpaB. New product name confidence: Class 2. New PubMed ID: 23716608.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BamMC406_0785
|
Burkholderia ambifaria
MC40-6 |
New gene name: kdoO. New product name: Kdo 3-hydroxylase KdoO. New product name confidence: Class 1. New PubMed ID: 21178073. New PubMed ID: 25204504. New comment: Responsible for Ko formation with Kdo2-lipid A as a substrate
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
Bmul_4910
|
Burkholderia multivorans
ATCC 17616 |
New gene name: bceK. New product name: BceK. New product name confidence: Class 2. New PubMed ID: 19948863. New PubMed ID: 22919582. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4210.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0528
|
Burkholderia pseudomallei
K96243 |
New gene name: tagD-4. New product name: type VI secretion system-associated protein TagD-4. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-4 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-2 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAM0330
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New PubMed ID: 15342570. New PubMed ID: 19744991. New comment: This gene is part of the B. cenocepacia J2315 VirB-VirD-like type IV secretion system cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURPS668_A2151
|
Burkholderia pseudomallei
668 |
New gene name: bprB. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1522.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSL2148
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSS0088
|
Burkholderia pseudomallei
K96243 |
New gene name: bpaD. New product name: putative trimeric autoransporter, BpaD. New product name confidence: Class 2. New PubMed ID: 23716608.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BAMB_RS03910
|
Burkholderia ambifaria
AMMD |
New gene name: kdoO. New product name: Kdo 3-hydroxylase KdoO. New product name confidence: Class 1. New PubMed ID: 21178073. New PubMed ID: 25204504. New comment: Responsible for Ko formation with Kdo2-lipid A as a substrate
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BAMB_RS27695
|
Burkholderia ambifaria
AMMD |
New gene name: bceK. New product name: BceK. New product name confidence: Class 2. New PubMed ID: 19948863. New PubMed ID: 22919582. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4210.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0529
|
Burkholderia pseudomallei
K96243 |
New gene name: tssJ-4. New product name: type VI secretion system protein TssJ-4. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-4 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-2 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAM0331
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New PubMed ID: 15342570. New PubMed ID: 19744991. New comment: This gene is part of the B. cenocepacia J2315 VirB-VirD-like type IV secretion system cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURPS1710b_A056
|
Burkholderia pseudomallei
1710b |
New gene name: bprB. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1522.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSL2151
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSS1493
|
Burkholderia pseudomallei
K96243 |
New gene name: tssA-5. New product name confidence: Class 2. New PubMed ID: 17660433.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAL2079
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New PubMed ID: 15610978. New comment: .Annotation transferred from: UniProtKB:P0A722.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
I35_RS20395
|
Burkholderia cenocepacia
H111 |
New gene name: bceK. New product name: BceK. New product name confidence: Class 2. New PubMed ID: 19948863. New PubMed ID: 22919582. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4210.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0530
|
Burkholderia pseudomallei
K96243 |
New gene name: tssK-4. New product name: type VI secretion system protein TssK-4. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-4 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-2 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAM0332
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New PubMed ID: 15342570. New PubMed ID: 19744991. New comment: This gene is part of the B. cenocepacia J2315 VirB-VirD-like type IV secretion system cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURPS1106A_A206
|
Burkholderia pseudomallei
1106a |
New gene name: bprB. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1522.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSL2155
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSS1494
|
Burkholderia pseudomallei
K96243 |
New gene name: regB. New product name confidence: Class 2. New PubMed ID: 17660433.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAL3455
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New PubMed ID: 15610978. New comment: .Annotation transferred from: UniProtKB:P0A725.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS07650
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: bceK. New product name: BceK. New product name confidence: Class 2. New PubMed ID: 19948863. New PubMed ID: 22919582. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4210.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0531
|
Burkholderia pseudomallei
K96243 |
New gene name: tssL-4. New product name: type VI secretion system protein TssL-4. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-4 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-2 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAM0333
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New PubMed ID: 15342570. New PubMed ID: 19744991. New comment: This gene is part of the B. cenocepacia J2315 VirB-VirD-like type IV secretion system cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BMA10247_A0766
|
Burkholderia mallei
NCTC 10247 |
New gene name: bprB. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1522.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSL2156
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSS1495
|
Burkholderia pseudomallei
K96243 |
New gene name: regA. New product name confidence: Class 2. New PubMed ID: 17660433.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAL2081
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New PubMed ID: 15610978. New comment: .Annotation transferred from: UniProtKB:P21645.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCEP18194_RS34065
|
Burkholderia lata
383 |
New gene name: bceK. New product name: BceK. New product name confidence: Class 2. New PubMed ID: 19948863. New PubMed ID: 22919582. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4210.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0532
|
Burkholderia pseudomallei
K96243 |
New gene name: tssM-4. New product name: type VI secretion system protein TssM-4. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-4 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-2 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAM0334
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New PubMed ID: 15342570. New PubMed ID: 19744991. New comment: This gene is part of the B. cenocepacia J2315 VirB-VirD-like type IV secretion system cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BMA10229_2085
|
Burkholderia mallei
NCTC 10229 |
New gene name: bprB. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1522.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSL2158
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSS1496
|
Burkholderia pseudomallei
K96243 |
New gene name: tssB-5. New product name confidence: Class 2. New PubMed ID: 17660433.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAL2078
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New PubMed ID: 15610978. New comment: .Annotation transferred from: UniProtKB:P10441.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAM0865
|
Burkholderia cenocepacia
J2315 |
New PubMed ID: 19948863. New comment: Removed gene name bceL because it was incorrectly assigned in a previous study. Analysis of other Burkholderia genomes including B. phytofirmans and B. xenovorans indicated that the protein was absent from the bce cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0515
|
Burkholderia pseudomallei
K96243 |
New gene name: tssI-6. New product name: type VI secretion system protein TssI-6. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-6 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-3 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAM0335
|
Burkholderia cenocepacia
J2315 |
New gene name: virD4. New product name: pseudogene (virD4). New PubMed ID: 18931103. New comment: The virD4 homologue (BCAM0335) contains a frameshift mutation (PMID:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BMAA1518.1
|
|
New gene name: bprB. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1522.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSL2159
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSS1497
|
Burkholderia pseudomallei
K96243 |
New gene name: tssC-5. New product name confidence: Class 2. New PubMed ID: 17660433.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAL2154
|
Burkholderia cenocepacia
J2315 |
New gene name: lpxH. New product name confidence: Class 2. New PubMed ID: 28085228. New comment: .Annotation transferred from: UniProtKB:P43341.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAM1003
|
Burkholderia cenocepacia
J2315 |
New gene name: bceM. New product name: GDP-6-deoxy-D-lyxo-4-hexulose reductase BceM. New PubMed ID: 19948863. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4471.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0516
|
Burkholderia pseudomallei
K96243 |
New gene name: tssH-6. New product name: type VI secretion system protein TssH-6. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-6 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-3 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS19230
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: virB2. New product name confidence: Class 2. New PubMed ID: 15342570. New PubMed ID: 19744991. New comment: This gene is part of the B. cenocepacia K56-2 VirB-VirD-like type IV secretion system cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BTH_II0843
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: bprA. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1530.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSL2168
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSS1498
|
Burkholderia pseudomallei
K96243 |
New gene name: tssD-5. New product name confidence: Class 2. New PubMed ID: 17660433.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAL2759
|
Burkholderia cenocepacia
J2315 |
New gene name: lpxK. New product name: LpxK. New product name confidence: Class 2. New PubMed ID: 28085228. New comment: .Annotation transferred from: UniProtKB:P27300.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
AK34_RS06470
|
Burkholderia dolosa
AU0158 |
New gene name: bceM. New product name: GDP-6-deoxy-D-lyxo-4-hexulose reductase BceM. New PubMed ID: 19948863. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4471.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0517
|
Burkholderia pseudomallei
K96243 |
New gene name: tssG-6. New product name: type VI secretion system protein TssG-6. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-6 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-3 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS19235
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: virB3. New product name confidence: Class 2. New PubMed ID: 15342570. New PubMed ID: 19744991. New comment: This gene is part of the B. cenocepacia K56-2 VirB-VirD-like type IV secretion system cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSS1530
|
Burkholderia pseudomallei
K96243 |
New product name confidence: Class 1. New PubMed ID: 20951592.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSL2169
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSS1499
|
Burkholderia pseudomallei
K96243 |
New gene name: tssE-5. New product name confidence: Class 2. New PubMed ID: 17660433.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAL0508
|
Burkholderia cenocepacia
J2315 |
New gene name: lpxL. New product name: lipid A biosynthesis myristoyl acyltransferase LpxL. New product name confidence: Class 1. New PubMed ID: 28085228. New comment:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS1689
|
Burkholderia pseudomallei
K96243 |
New gene name: bceM. New product name: GDP-6-deoxy-D-lyxo-4-hexulose reductase BceM. New PubMed ID: 19948863. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4471.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0518
|
Burkholderia pseudomallei
K96243 |
New gene name: tssF-6. New product name: type VI secretion system protein TssF-6. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-6 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-3 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS19240
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: virB4. New product name confidence: Class 2. New PubMed ID: 15342570. New PubMed ID: 19744991. New comment: This gene is part of the B. cenocepacia K56-2 VirB-VirD-like type IV secretion system cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURPS668_A2160
|
Burkholderia pseudomallei
668 |
New gene name: bprA. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1530.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSL2192
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSS1500
|
Burkholderia pseudomallei
K96243 |
New gene name: tssF-5. New product name confidence: Class 2. New PubMed ID: 17660433.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAL0788
|
Burkholderia cenocepacia
J2315 |
New gene name: pagL. New product name: Lipid A deacylase PagL. New product name confidence: Class 1. New PubMed ID: 28085228. New comment:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BTH_II0689
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: bceM. New product name: GDP-6-deoxy-D-lyxo-4-hexulose reductase BceM. New PubMed ID: 19948863. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4471.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0519
|
Burkholderia pseudomallei
K96243 |
New gene name: tssE-6. New product name: type VI secretion system protein TssE-6. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-6 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-3 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS19245
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: virB6. New product name confidence: Class 2. New PubMed ID: 15342570. New PubMed ID: 19744991. New comment: This gene is part of the B. cenocepacia K56-2 VirB-VirD-like type IV secretion system cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURPS1710b_A056
|
Burkholderia pseudomallei
1710b |
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1530.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSL2197
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSS1501
|
Burkholderia pseudomallei
K96243 |
New gene name: tssG-5. New product name confidence: Class 2. New PubMed ID: 17660433.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAL2408
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New PubMed ID: 28085228. New PubMed ID: 8809774. Annotation transferred from: UniProtKB:P60752.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
bglu_1g06560
|
Burkholderia glumae
BGR1 |
New gene name: bceM. New product name: GDP-6-deoxy-D-lyxo-4-hexulose reductase BceM. New PubMed ID: 19948863. New comment: Member of the bce-II gene cluster.Annotation transferred from: BGD:Bcep1808_4471.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0520
|
Burkholderia pseudomallei
K96243 |
New gene name: tssD-6. New product name: type VI secretion system protein TssD-6. New gene name synonym: hcp3. New product name synonym: hemolysin-coregulated protein Hcp3. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-6 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-3 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS19250
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: virB5. New product name confidence: Class 2. New PubMed ID: 15342570. New PubMed ID: 19744991. New comment: This gene is part of the B. cenocepacia K56-2 VirB-VirD-like type IV secretion system cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURPS1106A_A207
|
Burkholderia pseudomallei
1106a |
New gene name: bprA. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1530.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSL2203
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|