Burkholderia ambifaria MC40-6, BamMC406_0785 (kdoO)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia ambifaria MC40-6
GCF_000019925.1|latest
Locus Tag
BamMC406_0785
NCBI Locus TagBAMMC406_RS04005
Name
kdoO
Replicon chromosome 1
Genomic location 879052 - 879936 (+ strand)
CommentResponsible for Ko formation with Kdo2-lipid A as a substrate

Cross-References

RefSeq WP_011656152.1
GI 172059845
Entrez 6178954
GI 172059845
NCBI Locus Tag BAMMC406_RS04005
NCBI Old Locus Tag BamMC406_0785
RefSeq WP_011656152.1
UniProtKB Acc B1YUF4
UniProtKB ID B1YUF4_BURA4

Product

Feature Type CDS
Coding Frame 1
Product Name
Kdo 3-hydroxylase KdoO
Product Name Confidence: Class 1
Synonyms hypothetical protein
Evidence for Translation
Charge (pH 7) 3.59
Kyte-Doolittle Hydrophobicity Value -0.237
Molecular Weight (kDa) 32807.4
Isoelectric Point (pI) 8.48

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 28 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG000751 (654 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BamMC406_0785
Search term: kdoO

References

PubMed ID: 21178073
PubMed ID: 25204504