| Apr 30, 2018 |
BURCENK562V_RS29135
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: wbxB. New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster.Annotation transferred from: BGD:BCAL3116.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS29140
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: wbxA. New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster.Annotation transferred from: BGD:BCAL3115.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURCENK562V_RS2
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: wbiI. New product name confidence: Class 2. New PubMed ID: 16513737.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Sep 15, 2008 |
Bcep18194_A3984
|
|
New gene name: wbiI. New homology: 97% identity to wbiI[accession number AY523838]. New evidence reference (PMID): 15364998.
|
Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
|
| Sep 15, 2008 |
Bamb_0765
|
|
New gene name: wbiI. New homology: 94% identity to wbiI[accession number AY523838]. New evidence reference (PMID): 15364998.
|
Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
|
| Sep 15, 2008 |
Bcen_0408
|
|
New gene name: wbiI. New homology: 100% identity to wbiI[accession number AY523838]. New evidence reference (PMID): 15364998.
|
Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
|
| Sep 15, 2008 |
Bcen2424_0887
|
|
New gene name: wbiI. New homology: 100% identity to wbiI[accession number AY523838]. New evidence reference (PMID): 15364998.
|
Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
|
| Sep 15, 2008 |
Bcenmc03_0857
|
Burkholderia cenocepacia
MC0-3 |
New gene name: wbiI. New homology: 100% identity to wbiI[accession number AY523838].
|
Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
|
| Apr 10, 2015 |
BURCENK562V_RS2
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: wbiH. New product name confidence: Class 2. New PubMed ID: 24841205.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURCENK562V_RS2
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: wbiG. New product name confidence: Class 2. New PubMed ID: 16513737.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURCENK562V_RS2
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: wbiF. New product name confidence: Class 2. New PubMed ID: 16513737.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BTH_I1476
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: wbiB. New product name confidence: Class 1. New PubMed ID: 21640586. New comment:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL2407
|
Burkholderia cenocepacia
J2315 |
New gene name: wabS. New product name: WabS. New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO accession: GO:0009244 [IMP]. New evidence reference (PMID): 19525227.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL2406
|
Burkholderia cenocepacia
J2315 |
New gene name: wabR. New product name: wabR. New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO accession: GO:0009244 [IMP]. New evidence reference (PMID): 19525227.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL2404
|
Burkholderia cenocepacia
J2315 |
New gene name: wabQ. New product name: wabQ. New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO accession: GO:0009244 [IMP]. New evidence reference (PMID): 19525227.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL2403
|
Burkholderia cenocepacia
J2315 |
New gene name: wabP. New product name: WabP. New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO accession: GO:0009244 [IMP]. New evidence reference (PMID): 19525227.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL2402
|
Burkholderia cenocepacia
J2315 |
New gene name: wabO. New product name: WabO. New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO accession: GO:0009244 [IMP]. New evidence reference (PMID): 19525227.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL2405
|
Burkholderia cenocepacia
J2315 |
New gene name: waaL. New product name: waaL. New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO accession: GO:0009244 [IMP]. New evidence reference (PMID): 19525227.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS1494
|
Burkholderia pseudomallei
K96243 |
New gene name: virG. New product name: two-component regulatory system, response regulator VirG. New product name confidence: Class 1. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New PubMed ID: 21670170. New PubMed ID: 21300775. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-5 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-1 cluster later (PMID:21670170, PMID:22007185) and by the B. mallei literature (PMID:22892068, PMID:17555434).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS19275
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: virD4. New product name: type IV secretion system-coupling protein VirD4. New product name confidence: Class 2. New PubMed ID: 15342570. New PubMed ID: 19744991. New comment: This gene is part of the B. cenocepacia K56-2 VirB-VirD-like type IV secretion system cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAM0335
|
Burkholderia cenocepacia
J2315 |
New gene name: virD4. New product name: pseudogene (virD4). New PubMed ID: 18931103. New comment: The virD4 homologue (BCAM0335) contains a frameshift mutation (PMID:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS19260
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: virB9. New product name confidence: Class 2. New PubMed ID: 15342570. New PubMed ID: 19744991. New comment: This gene is part of the B. cenocepacia K56-2 VirB-VirD-like type IV secretion system cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM0332
|
Burkholderia cenocepacia
J2315 |
New gene name: virB9. New alternate gene name: bcvirB9. New pathway: VirB4/D4 Type IV Secretion System. New GO accession: GO:0030255 [IGC]. New evidence reference (PMID): 15342570. New evidence reference (PMID): 19744991. New evidence reference (PMID): 18824538.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS19255
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: virB8. New product name confidence: Class 2. New PubMed ID: 15342570. New PubMed ID: 19744991. New comment: This gene is part of the B. cenocepacia K56-2 VirB-VirD-like type IV secretion system cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM0331
|
Burkholderia cenocepacia
J2315 |
New gene name: virB8. New alternate gene name: bcvirB8. New pathway: VirB4/D4 Type IV Secretion System. New GO accession: GO:0030255 [IGC]. New evidence reference (PMID): 15342570. New evidence reference (PMID): 19744991. New evidence reference (PMID): 18824538.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM0330
|
Burkholderia cenocepacia
J2315 |
New gene name: virB7. New alternate gene name: bcvirB7. New pathway: VirB4/D4 Type IV Secretion System. New GO accession: GO:0030255 [IGC]. New evidence reference (PMID): 15342570. New evidence reference (PMID): 19744991. New evidence reference (PMID): 18824538.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS19245
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: virB6. New product name confidence: Class 2. New PubMed ID: 15342570. New PubMed ID: 19744991. New comment: This gene is part of the B. cenocepacia K56-2 VirB-VirD-like type IV secretion system cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM0328
|
Burkholderia cenocepacia
J2315 |
New gene name: virB6. New alternate gene name: bcvirB6. New pathway: VirB4/D4 Type IV Secretion System. New GO accession: GO:0030255 [IGC]. New evidence reference (PMID): 15342570. New evidence reference (PMID): 19744991. New evidence reference (PMID): 18824538.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS19250
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: virB5. New product name confidence: Class 2. New PubMed ID: 15342570. New PubMed ID: 19744991. New comment: This gene is part of the B. cenocepacia K56-2 VirB-VirD-like type IV secretion system cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM0329
|
Burkholderia cenocepacia
J2315 |
New gene name: virB5. New alternate gene name: bcvirB5. New pathway: VirB4/D4 Type IV Secretion System. New GO accession: GO:0030255 [IGC]. New evidence reference (PMID): 15342570. New evidence reference (PMID): 19744991. New evidence reference (PMID): 18824538.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS19240
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: virB4. New product name confidence: Class 2. New PubMed ID: 15342570. New PubMed ID: 19744991. New comment: This gene is part of the B. cenocepacia K56-2 VirB-VirD-like type IV secretion system cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM0327
|
Burkholderia cenocepacia
J2315 |
New gene name: virB4. New alternate gene name: bcvirB4. New pathway: VirB4/D4 Type IV Secretion System. New GO accession: GO:0030255 [IGC]. New evidence reference (PMID): 15342570. New evidence reference (PMID): 19744991. New evidence reference (PMID): 18824538.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS19235
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: virB3. New product name confidence: Class 2. New PubMed ID: 15342570. New PubMed ID: 19744991. New comment: This gene is part of the B. cenocepacia K56-2 VirB-VirD-like type IV secretion system cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM0326
|
Burkholderia cenocepacia
J2315 |
New gene name: virB3. New alternate gene name: bcvirB3. New pathway: VirB4/D4 Type IV Secretion System. New GO accession: GO:0030255 [IGC]. New evidence reference (PMID): 15342570. New evidence reference (PMID): 19744991. New evidence reference (PMID): 18824538.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS19230
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: virB2. New product name confidence: Class 2. New PubMed ID: 15342570. New PubMed ID: 19744991. New comment: This gene is part of the B. cenocepacia K56-2 VirB-VirD-like type IV secretion system cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM0325
|
Burkholderia cenocepacia
J2315 |
New gene name: virB2. New alternate gene name: bcvirB2. New pathway: VirB4/D4 Type IV Secretion System. New GO accession: GO:0030255 [IGC]. New evidence reference (PMID): 15342570. New evidence reference (PMID): 19744991. New evidence reference (PMID): 18824538.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS19270
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: virB11. New product name confidence: Class 2. New PubMed ID: 15342570. New PubMed ID: 19744991. New comment: This gene is part of the B. cenocepacia K56-2 VirB-VirD-like type IV secretion system cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM0334
|
Burkholderia cenocepacia
J2315 |
New gene name: virB11. New alternate gene name: bcvirB11. New pathway: VirB4/D4 Type IV Secretion System. New GO accession: GO:0030255 [IGC]. New evidence reference (PMID): 15342570. New evidence reference (PMID): 19744991. New evidence reference (PMID): 18824538.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS19265
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: virB10. New product name confidence: Class 2. New PubMed ID: 15342570. New PubMed ID: 19744991. New comment: This gene is part of the B. cenocepacia K56-2 VirB-VirD-like type IV secretion system cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM0333
|
Burkholderia cenocepacia
J2315 |
New gene name: virB10. New alternate gene name: bcvirB10. New pathway: VirB4/D4 Type IV Secretion System. New GO accession: GO:0030255 [IGC]. New evidence reference (PMID): 15342570. New evidence reference (PMID): 19744991. New evidence reference (PMID): 18824538.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM0324
|
Burkholderia cenocepacia
J2315 |
New gene name: virB1. New alternate gene name: bcvirB1. New pathway: VirB4/D4 Type IV Secretion System. New GO accession: GO:0030255 [IGC]. New evidence reference (PMID): 15342570. New evidence reference (PMID): 19744991. New evidence reference (PMID): 18824538.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS1495
|
Burkholderia pseudomallei
K96243 |
New gene name: virA. New product name: two-component regulatory system, sensor kinase VirA. New product name confidence: Class 1. New PubMed ID: 17660433. New PubMed ID: 21300775. New PubMed ID: 22007185. New PubMed ID: 17555434. New PubMed ID: 21670170. New PubMed ID: 26094804. New PubMed ID: 26159714. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-5 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-1 cluster later (PMID:21670170, PMID:22007185) and by the B. mallei literature (PMID:22892068, PMID:17555434).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BMAA0745
|
|
New gene name: virA. New product name confidence: Class 1. New PubMed ID: 17555434.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS29080
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: vioA. New product name: nucleotide sugar aminotransferase VioA. New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster.Annotation transferred from: BGD:BCAL3129.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BMAA0737
|
|
New gene name: vgrG1. New product name confidence: Class 2. New PubMed ID: 17555434. New PubMed ID: 21300775. New genomic context: T6SS-1 gene cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0265
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: vgrG-6. New pathway: T6SS-6 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 6 (T6SS-6).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0863
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: vgrG-5. New product name: VgrG-5. New pathway: T6SS-5 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II1893
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: vgrG-4b. New product name: VgrG-4b. New pathway: T6SS-4 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II1894
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: vgrG-4a. New product name: VgrG-4a. New pathway: T6SS-4 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0129
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: vgrG-2. New product name: VgrG-2. New pathway: T6SS-2 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 10, 2015 |
BMAA0728
|
|
New gene name: tssN. New product name confidence: Class 1. New PubMed ID: 23800426. New genomic context: T6SS-1 gene cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAL0351
|
Burkholderia cenocepacia
J2315 |
New gene name: tssM. New product name: type VI secretion system protein TssM. New gene name synonym: icmF. New product name confidence: Class 1. New PubMed ID: 18316384. New PubMed ID: 22102820. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
I35_RS01770
|
Burkholderia cenocepacia
H111 |
New gene name: tssM. New product name: type VI secretion system protein TssM. New gene name synonym: icmF. New product name confidence: Class 1. New PubMed ID: 18316384. New PubMed ID: 22102820. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS28285
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: tssM. New product name: type VI secretion system protein TssM. New gene name synonym: icmF. New product name confidence: Class 1. New PubMed ID: 18316384. New PubMed ID: 22102820. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BMAA0729
|
Burkholderia mallei
ATCC 23344 |
New gene name: tssM. New product name: deubiquitinase TssM. New product name confidence: Class 1. New subcellular localization: Extracellular (Class 1). New subcellular localization evidence code (ECO): ECO:000123. New subcellular localization PMID: 19168747. New PubMed ID: 19168747. New comment: An alternate start site identified in PMID:19168747 was used to replace the original start site.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSS1512
|
Burkholderia pseudomallei
K96243 |
New gene name: tssM. New product name confidence: Class 1. New PubMed ID: 24866793.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0526
|
Burkholderia pseudomallei
K96243 |
New gene name: tssM-6. New product name: type VI secretion system protein TssM-6. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-6 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-3 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSS2104
|
Burkholderia pseudomallei
K96243 |
New gene name: TssM-6. New product name confidence: Class 2. New PubMed ID: 17660433.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0254
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssM-6. New pathway: T6SS-6 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 6 (T6SS-6).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0855
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssM-5. New product name: TssM-5. New pathway: T6SS-5 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSS1511
|
Burkholderia pseudomallei
K96243 |
New gene name: tssM-5. New product name confidence: Class 2. New PubMed ID: 17660433.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0532
|
Burkholderia pseudomallei
K96243 |
New gene name: tssM-4. New product name: type VI secretion system protein TssM-4. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-4 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-2 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II1885
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssM-4. New product name: TssM-4. New pathway: T6SS-4 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0167
|
Burkholderia pseudomallei
K96243 |
New gene name: tssM-3. New product name: type VI secretion system protein TssM-3 (T6SS-4). New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-3 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-4 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0103
|
Burkholderia pseudomallei
K96243 |
New gene name: tssM-2. New product name: type VI secretion system protein TssM-2. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-2 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-5 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0127
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssM-2. New product name: TssM-2. New pathway: T6SS-2 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSL3097
|
Burkholderia pseudomallei
K96243 |
New gene name: tssM-1. New product name: type VI secretion system protein TssM-1. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-1 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-1 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_I2954
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssM-1. New product name: TssM-1. New pathway: T6SS-1 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 1 (T6SS-1).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAL0337
|
Burkholderia cenocepacia
J2315 |
New gene name: tssL. New product name: type VI secretion system protein TssL. New gene name synonym: bcsP. New product name confidence: Class 1. New PubMed ID: 18316384. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
I35_RS01700
|
Burkholderia cenocepacia
H111 |
New gene name: tssL. New product name: type VI secretion system protein TssL. New gene name synonym: bcsP. New product name confidence: Class 1. New PubMed ID: 18316384. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS28215
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: tssL. New product name: type VI secretion system protein TssL. New gene name synonym: bcsP. New product name confidence: Class 1. New PubMed ID: 18316384. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BMAA0731
|
|
New gene name: tssL. New product name confidence: Class 2. New PubMed ID: 17555434. New PubMed ID: 21300775. New genomic context: T6SS-1 gene cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0527
|
Burkholderia pseudomallei
K96243 |
New gene name: tssL-6. New product name: type VI secretion system protein TssL-6. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-6 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-3 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSS2105
|
Burkholderia pseudomallei
K96243 |
New gene name: TssL-6. New product name confidence: Class 2. New PubMed ID: 17660433.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0253
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssL-6. New pathway: T6SS-6 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 6 (T6SS-6).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0856
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssL-5. New product name: TssL-5. New pathway: T6SS-5 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSS1510
|
Burkholderia pseudomallei
K96243 |
New gene name: tssL-5. New product name confidence: Class 2. New PubMed ID: 17660433.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0531
|
Burkholderia pseudomallei
K96243 |
New gene name: tssL-4. New product name: type VI secretion system protein TssL-4. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-4 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-2 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II1886
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssL-4. New product name: TssL-4. New pathway: T6SS-4 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0168
|
Burkholderia pseudomallei
K96243 |
New gene name: tssL-3. New product name: type VI secretion system protein TssL-3 (T6SS-4). New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-3 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-4 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0102
|
Burkholderia pseudomallei
K96243 |
New gene name: tssL-2b. New product name: type VI secretion system protein TssL-2. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-2 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-5 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0126
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssL-2b. New product name: TssL-2b. New pathway: T6SS-2 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0095
|
Burkholderia pseudomallei
K96243 |
New gene name: tssL-2a. New product name: type VI secretion system-associated protein TssL-2a. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-2 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-5 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0119
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssL-2a. New product name: TssL-2a. New pathway: T6SS-2 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSL3111
|
Burkholderia pseudomallei
K96243 |
New gene name: tssL-1. New product name: type VI secretion system protein TssL-1. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-1 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-1 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_I2968
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssL-1. New product name: TssL-1. New pathway: T6SS-1 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAL0338
|
Burkholderia cenocepacia
J2315 |
New gene name: tssK. New product name: type VI secretion system protein TssK. New gene name synonym: bcsO. New product name confidence: Class 1. New PubMed ID: 18316384. New PubMed ID: 23921384. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
I35_RS01705
|
Burkholderia cenocepacia
H111 |
New gene name: tssK. New product name: type VI secretion system protein TssK. New gene name synonym: bcsO. New product name confidence: Class 1. New PubMed ID: 18316384. New PubMed ID: 23921384. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS28220
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: tssK. New product name: type VI secretion system protein TssK. New gene name synonym: bcsO. New product name confidence: Class 1. New PubMed ID: 18316384. New PubMed ID: 23921384. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BMAA0732
|
|
New gene name: tssK. New product name confidence: Class 2. New PubMed ID: 17555434. New PubMed ID: 21300775. New genomic context: T6SS-1 gene cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0528
|
Burkholderia pseudomallei
K96243 |
New gene name: tssK-6. New product name: type VI secretion system protein TssK-6. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-6 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-3 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSS2106
|
Burkholderia pseudomallei
K96243 |
New gene name: TssK-6. New product name confidence: Class 2. New PubMed ID: 17660433.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0252
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssk-6. New pathway: T6SS-6 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 6 (T6SS-6).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0857
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssk-5. New product name: Tssk-5. New pathway: T6SS-5 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSS1509
|
Burkholderia pseudomallei
K96243 |
New gene name: tssK-5. New product name confidence: Class 2. New PubMed ID: 17660433.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0530
|
Burkholderia pseudomallei
K96243 |
New gene name: tssK-4. New product name: type VI secretion system protein TssK-4. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-4 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-2 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II1887
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssK-4. New product name: TssK-4. New pathway: T6SS-4 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0169
|
Burkholderia pseudomallei
K96243 |
New gene name: tssK-3. New product name: type VI secretion system protein TssK-3 (T6SS-4). New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-3 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-4 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0101
|
Burkholderia pseudomallei
K96243 |
New gene name: tssK-2. New product name: type VI secretion system protein TssK-2. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-2 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-5 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0125
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssK-2. New product name: TssK-2. New pathway: T6SS-2 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|