Burkholderia cenocepacia J2315, BCAL2403 (wabP)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia cenocepacia J2315
GCF_000009485.1|latest
Locus Tag
BCAL2403
NCBI Locus TagQU43_RS48680
Name
wabP
Replicon chromosome 1
Genomic location 2657904 - 2659088 (- strand)

Cross-References

RefSeq YP_002231527.1
GI 206560762
Entrez 6932475
GI 206560762
INSDC CAR52704.1
NCBI Locus Tag QU43_RS48680
NCBI Old Locus Tag BCAL2403
RefSeq YP_002231527.1
UniParc UPI00017B9859
UniProtKB Acc B4E6C9
UniProtKB ID B4E6C9_BURCJ
UniRef100 UniRef100_A0A0D1D5U5
UniRef50 UniRef50_Q3JUI0
UniRef90 UniRef90_A0A095EWD2

Product

Feature Type CDS
Coding Frame 1
Product Name
putative LPS core biosynthesis protein
Product Name Confidence: Class 1
Synonyms WabP
Evidence for Translation
Charge (pH 7) 9.69
Kyte-Doolittle Hydrophobicity Value -0.060
Molecular Weight (kDa) 43105.0
Isoelectric Point (pI) 9.15

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 282 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG002196 (1008 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BCAL2403
Search term: wabP

References

Biosynthesis and structure of the Burkholderia cenocepacia K56-2 lipopolysaccharide core oligosaccharide: truncation of the core oligosaccharide leads to increased binding and sensitivity to polymyxin B.
Ortega X, Silipo A, Saldías MS, Bates CC, Molinaro A, Valvano MA
J Biol Chem 2009 Aug 7;284(32):21738-51
PubMed ID: 19525227