| Apr 30, 2018 |
BPSS1831
|
Burkholderia pseudomallei
K96243 |
New gene name: bceE. New product name: BceE. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4204.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSL3101
|
Burkholderia pseudomallei
K96243 |
New gene name: tssH-1. New product name: type VI secretion system protein TssH-1. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-1 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-1 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS1622
|
Burkholderia pseudomallei
K96243 |
New gene name: bpspK2. New product name: type III secretion system inner rod component BpspK2 (T3SS-2). New product name confidence: Class 2. New PubMed ID: 15621426. New PubMed ID: 28664152. New comment: This gene is part of the type III secretion system T3SS-2 locus found in B. pseudomallei. B. pseudomallei T3SS-1 and T3SS-2, but not T3SS-3 contribute to pathogenicity in Solanum lycopersicum (tomato) but not human monocytic cell line THP-1. (PMID:20109238).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSS1546
|
Burkholderia pseudomallei
K96243 |
New product name confidence: Class 1. New PubMed ID: 20951592.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSL1404
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSS0720
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAM0049
|
Burkholderia cenocepacia
J2315 |
New gene name: fixK. New product name: FixK. New product name confidence: Class 2. New PubMed ID: 28046077. New comment: .Annotation transferred from: UniProtKB:P13295.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BTH_II0546
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: bceE. New product name: BceE. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4204.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSL3102
|
Burkholderia pseudomallei
K96243 |
New gene name: tssG-1. New product name: type VI secretion system protein TssG-1. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-1 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-1 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS1623
|
Burkholderia pseudomallei
K96243 |
New gene name: bpspJ2. New product name: type III secretion system inner rod component BpspJ2 (T3SS-2). New product name confidence: Class 2. New PubMed ID: 15621426. New PubMed ID: 28664152. New comment: This gene is part of the type III secretion system T3SS-2 locus found in B. pseudomallei. B. pseudomallei T3SS-1 and T3SS-2, but not T3SS-3 contribute to pathogenicity in Solanum lycopersicum (tomato) but not human monocytic cell line THP-1. (PMID:20109238).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURPS668_A2176
|
Burkholderia pseudomallei
668 |
New gene name: bsaN. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1546.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSL1405
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSS0767
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
bglu_2g16500
|
Burkholderia glumae
BGR1 |
New gene name: bceE. New product name: BceE. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4204.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSL3103
|
Burkholderia pseudomallei
K96243 |
New gene name: tssF-1. New product name: type VI secretion system protein TssF-1. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-1 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-1 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS1624
|
Burkholderia pseudomallei
K96243 |
New gene name: bpscJ2. New product name: type III secretion system inner membrane ring component BpscJ2 (T3SS-2). New gene name synonym: sctJ. New product name confidence: Class 2. New PubMed ID: 15621426. New PubMed ID: 28664152. New comment: This gene is part of the type III secretion system T3SS-2 locus found in B. pseudomallei. B. pseudomallei T3SS-1 and T3SS-2, but not T3SS-3 contribute to pathogenicity in Solanum lycopersicum (tomato) but not human monocytic cell line THP-1. (PMID:20109238).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURPS1710b_A058
|
Burkholderia pseudomallei
1710b |
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1546.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSL1413
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSS0772
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
Bmul_4916
|
Burkholderia multivorans
ATCC 17616 |
New gene name: bceE. New product name: BceE. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4204.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSL3104
|
Burkholderia pseudomallei
K96243 |
New gene name: tssE-1. New product name: type VI secretion system protein TssE-1. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-1 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-1 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS1625
|
Burkholderia pseudomallei
K96243 |
New gene name: bpspH2. New product name: type III secretion system inner membrane component BpspH2 (T3SS-2). New gene name synonym: sctK. New product name confidence: Class 2. New PubMed ID: 15621426. New PubMed ID: 28664152. New comment: This gene is part of the type III secretion system T3SS-2 locus found in B. pseudomallei. B. pseudomallei T3SS-1 and T3SS-2, but not T3SS-3 contribute to pathogenicity in Solanum lycopersicum (tomato) but not human monocytic cell line THP-1. (PMID:20109238).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURPS1106A_A208
|
Burkholderia pseudomallei
1106a |
New gene name: bsaN. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1546.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSL1445
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSS0802
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAL2402
|
Burkholderia cenocepacia
J2315 |
New PubMed ID: 19525227. New comment:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BAMB_RS27665
|
Burkholderia ambifaria
AMMD |
New gene name: bceE. New product name: BceE. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4204.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSL3105
|
Burkholderia pseudomallei
K96243 |
New gene name: tssD-1. New product name: type VI secretion system protein TssD-1. New gene name synonym: hcp6. New product name synonym: hemolysin-coregulated protein Hcp6. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-1 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-1 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS1626
|
Burkholderia pseudomallei
K96243 |
New gene name: bpscL2. New product name: type III secretion system stator protein BpscL2 (T3SS-2). New gene name synonym: sctL. New product name confidence: Class 2. New PubMed ID: 15621426. New PubMed ID: 28664152. New comment: This gene is part of the type III secretion system T3SS-2 locus found in B. pseudomallei. B. pseudomallei T3SS-1 and T3SS-2, but not T3SS-3 contribute to pathogenicity in Solanum lycopersicum (tomato) but not human monocytic cell line THP-1. (PMID:20109238).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BMA10247_A0739
|
Burkholderia mallei
NCTC 10247 |
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1546.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSL1458
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSS0827
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAL2403
|
Burkholderia cenocepacia
J2315 |
New PubMed ID: 19525227. New comment:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
I35_RS20365
|
Burkholderia cenocepacia
H111 |
New gene name: bceE. New product name: BceE. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4204.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSL3106
|
Burkholderia pseudomallei
K96243 |
New gene name: tssC-1. New product name: type VI secretion system protein TssC-1. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-1 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-1 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS1627
|
Burkholderia pseudomallei
K96243 |
New gene name: bpscN2. New product name: type III secretion system ATPase BpscN2 (T3SS-2). New gene name synonym: sctN. New product name confidence: Class 2. New PubMed ID: 15621426. New PubMed ID: 28664152. New comment: This gene is part of the type III secretion system T3SS-2 locus found in B. pseudomallei. B. pseudomallei T3SS-1 and T3SS-2, but not T3SS-3 contribute to pathogenicity in Solanum lycopersicum (tomato) but not human monocytic cell line THP-1. (PMID:20109238).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BMA10229_2059
|
Burkholderia mallei
NCTC 10229 |
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1546.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSL1460
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSS0839
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAL2404
|
Burkholderia cenocepacia
J2315 |
New PubMed ID: 19525227. New comment:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS07620
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: bceE. New product name: BceE. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4204.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSL3107
|
Burkholderia pseudomallei
K96243 |
New gene name: tssB-1. New product name: type VI secretion system protein TssB-1. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-1 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-1 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS1628
|
Burkholderia pseudomallei
K96243 |
New gene name: bpspD2. New product name: type III secretion system stalk protein BpspD2 (T3SS-2). New gene name synonym: sctO. New product name confidence: Class 2. New PubMed ID: 15621426. New PubMed ID: 28664152. New comment: This gene is part of the type III secretion system T3SS-2 locus found in B. pseudomallei. B. pseudomallei T3SS-1 and T3SS-2, but not T3SS-3 contribute to pathogenicity in Solanum lycopersicum (tomato) but not human monocytic cell line THP-1. (PMID:20109238).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BMAA1545
|
|
New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1546.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSL1461
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSS0879
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAL2405
|
Burkholderia cenocepacia
J2315 |
New PubMed ID: 19525227. New comment:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCEP18194_RS34095
|
Burkholderia lata
383 |
New gene name: bceE. New product name: BceE. New product name confidence: Class 2. New PubMed ID: 19948863. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4204.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSL3108
|
Burkholderia pseudomallei
K96243 |
New gene name: tagM-1. New product name: type VI secretion system-associated protein TagM-1. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-1 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-1 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS1629
|
Burkholderia pseudomallei
K96243 |
New gene name: bpscT2. New product name: type III secretion system inner membrane export apparatus protein BpscT2 (T3SS-2). New gene name synonym: sctT. New product name confidence: Class 2. New PubMed ID: 15621426. New PubMed ID: 28664152. New comment: This gene is part of the type III secretion system T3SS-2 locus found in B. pseudomallei. B. pseudomallei T3SS-1 and T3SS-2, but not T3SS-3 contribute to pathogenicity in Solanum lycopersicum (tomato) but not human monocytic cell line THP-1. (PMID:20109238).
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BTH_II0826
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: bsaM. New product name confidence: Class 2. New PubMed ID: 20951592. Annotation transferred from: Locus Tag:BPSS1547.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSL1477
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSS0897
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAL2406
|
Burkholderia cenocepacia
J2315 |
New PubMed ID: 19525227. New comment:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAM0859
|
Burkholderia cenocepacia
J2315 |
New PubMed ID: 23435894. New PubMed ID: 25486990. New PubMed ID: 26590274. New PubMed ID: 19948863. New comment: Member of the bce-I gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSL3109
|
Burkholderia pseudomallei
K96243 |
New gene name: tssJ-1. New product name: type VI secretion system protein TssJ-1. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-1 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-1 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0688
|
Burkholderia pseudomallei
K96243 |
New gene name: bprR. New product name: two-component response regulator BprR. New product name confidence: Class 1. New PubMed ID: 27147217. New comment:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSS1547
|
Burkholderia pseudomallei
K96243 |
New gene name: bsaM. New product name confidence: Class 1. New PubMed ID: 20951592.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSL1478
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSS0913
|
Burkholderia pseudomallei
K96243 |
New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAL2407
|
Burkholderia cenocepacia
J2315 |
New PubMed ID: 19525227. New comment:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
AK34_RS07125
|
Burkholderia dolosa
AU0158 |
New gene name: bceF. New product name: tyrosine kinase BceF. New product name confidence: Class 2. New PubMed ID: 17114319. New PubMed ID: 23435894. New PubMed ID: 25486990. New PubMed ID: 26590274. New PubMed ID: 19948863. New comment: Member of the bce-I gene cluster.Annotation transferred from: BGD:Bcep1808_4205.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSL3110
|
Burkholderia pseudomallei
K96243 |
New gene name: tssK-1. New product name: type VI secretion system protein TssK-1. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-1 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-1 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0687
|
Burkholderia pseudomallei
K96243 |
New gene name: bprS. New product name: two-component sensor kinase BprS. New product name confidence: Class 1. New PubMed ID: 27147217. New comment:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Aug 25, 2008 |
Bcenmc03_6383
|
Burkholderia cenocepacia
MC0-3 |
New gene name: aidA. New product name: nematocidal protein AidA. New product name confidence: Class 2. New homology: 55% identity to AidA [Ralstonia solanacearum UW551]. New evidence reference (PMID): 15557647.
|
Literature Review. Eberl, Leo. University Zurich, Zurich, Switzerland
|
| Aug 25, 2008 |
Bcen2424_5874
|
|
New gene name: aidA. New product name: nematocidal protein AidA. New product name confidence: Class 2. New homology: 55% identity to AidA [Ralstonia solanacearum UW551]. New evidence reference (PMID): 15557647.
|
Literature Review. Eberl, Leo. University Zurich, Zurich, Switzerland
|
| Aug 25, 2008 |
Bcen_5510
|
|
New gene name: aidA. New product name: nematocidal protein AidA. New product name confidence: Class 2. New homology: 55% identity to AidA [Ralstonia solanacearum UW551]. New evidence reference (PMID): 15557647.
|
Literature Review. Eberl, Leo. University Zurich, Zurich, Switzerland
|
| Aug 25, 2008 |
Bcep18194_C7212
|
|
New gene name: aidA. New product name: nematocidal protein AidA. New product name confidence: Class 2. New homology: 55% identity to AidA [Ralstonia solanacearum UW551]. New evidence reference (PMID): 15557647.
|
Literature Review. Eberl, Leo. University Zurich, Zurich, Switzerland
|
| Apr 22, 2009 |
BCAL3378
|
Burkholderia cenocepacia
J2315 |
New product name: ferric uptake regulator Fur. New product name confidence: Class 2. New evidence reference (PMID): 18057135.
|
Literature review. Dennis, J. J. Department of Biological Sciences, University of Alberta, Edmonton, Alberta.
|
| Sep 15, 2008 |
Bcen_2003
|
|
New gene name: coxG. New product name confidence: Class 2. New homology: 82% identity to CoxG[B. cenocepacia j2315]. New evidence reference (PMID): 17220310.
|
Literature review. Based on article by Valvano, M. A. University of Western Ontario, Ontario.
|
| Sep 15, 2008 |
Bcen_2006
|
|
New gene name: htrA. New product name: HtrA protease. New product name confidence: Class 2. New subcellular localization confidence: Class 2. New homology: 92% identity to HtrA [B. cenocepacia J2315]. New evidence reference (PMID): 17220310.
|
Literature review. Based on article by Valvano, M. A. University of Western Ontario, Ontario.
|
| Sep 15, 2008 |
Bcen2424_2613
|
|
New gene name: coxG. New product name confidence: Class 2. New homology: 82% identity to CoxG[B. cenocepacia J2315]. New evidence reference (PMID): 17220310.
|
Literature review. Based on article by Valvano, M. A. University of Western Ontario, Ontario.
|
| Sep 15, 2008 |
Bcen2424_2616
|
|
New gene name: htrA. New product name: HtrA protease. New product name confidence: Class 2. New subcellular localization confidence: Class 2. New homology: 92% identity to HtrA [B. cenocepacia J2315]. New evidence reference (PMID): 17220310.
|
Literature review. Based on article by Valvano, M. A. University of Western Ontario, Ontario.
|
| Sep 15, 2008 |
Bcenmc03_2642
|
Burkholderia cenocepacia
MC0-3 |
New gene name: coxG. New product name confidence: Class 2. New homology: 81% identity to CoxG[B. cenocepacia J2315]. New evidence reference (PMID): 17220310.
|
Literature review. Based on article by Valvano, M. A. University of Western Ontario, Ontario.
|
| Sep 15, 2008 |
Bcenmc03_2645
|
Burkholderia cenocepacia
MC0-3 |
New gene name: htrA. New product name: HtrA protease. New product name confidence: Class 2. New subcellular localization confidence: Class 2. New homology: 92% identity to HtrA [B. cenocepacia J2315]. New evidence reference (PMID): 17220310.
|
Literature review. Based on article by Valvano, M. A. University of Western Ontario, Ontario.
|
| Sep 15, 2008 |
Bcep1808_2728
|
Burkholderia vietnamiensis
G4 |
New gene name: coxG. New product name confidence: Class 2. New homology: 68% identity to CoxG[B. cenocepacia J2315]. New evidence reference (PMID): 17220310.
|
Literature review. Based on article by Valvano, M. A. University of Western Ontario, Ontario.
|
| Sep 15, 2008 |
Bcep1808_2731
|
Burkholderia vietnamiensis
G4 |
New gene name: htrA. New product name: HtrA protease. New product name confidence: Class 2. New subcellular localization confidence: Class 2. New homology: 89% identity to HtrA [B. cenocepacia J2315]. New evidence reference (PMID): 17220310.
|
Literature review. Based on article by Valvano, M. A. University of Western Ontario, Ontario.
|
| Sep 15, 2008 |
Bcep18194_A5944
|
|
New gene name: coxG. New product name confidence: Class 2. New homology: 79% identity to CoxG[B. cenocepacia J2315]. New evidence reference (PMID): 17220310.
|
Literature review. Based on article by Valvano, M. A. University of Western Ontario, Ontario.
|
| Sep 15, 2008 |
Bcep18194_A5947
|
|
New gene name: htrA. New product name: HtrA protease. New product name confidence: Class 2. New subcellular localization confidence: Class 2. New homology: 92% identity to HtrA [B. cenocepacia J2315]. New evidence reference (PMID): 17220310.
|
Literature review. Based on article by Valvano, M. A. University of Western Ontario, Ontario.
|
| Sep 15, 2008 |
Bamb_2660
|
|
New gene name: coxG. New product name confidence: Class 2. New homology: 76% identity to CoxG[B. cenocepacia J2315]. New evidence reference (PMID): 17220310.
|
Literature review. Based on article by Valvano, M. A. University of Western Ontario, Ontario.
|
| Sep 15, 2008 |
Bamb_2663
|
|
New gene name: htrA. New product name: HtrA protease. New product name confidence: Class 2. New subcellular localization confidence: Class 2. New homology: 89% identity to HtrA [B. cenocepacia J2315]. New evidence reference (PMID): 17220310.
|
Literature review. Based on article by Valvano, M. A. University of Western Ontario, Ontario.
|
| Sep 15, 2008 |
Bcen_1823
|
|
New gene name: sodC. New product name: superoxide dismutase, copper/zinc binding SodC. New product name confidence: Class 1. New subcellular localization confidence: Class 1. New evidence reference (PMID): 17325048.
|
Literature review. Based on article by Valvano, M. A. University of Western Ontario, London, Ontario.
|
| Sep 15, 2008 |
Bcen_2177
|
|
New gene name: rpoN. New product name confidence: Class 1. New homology: 91% identity to RpoN [B. cenocepacia J2315]. New evidence reference (PMID): 18195023.
|
Literature review. Based on article by Valvano, M. A. University of Western Ontario, London, Ontario.
|
| Sep 15, 2008 |
Bcen_2785
|
|
New gene name: hppD. New product name: 4-hydroxyphenylpyruvic acid dioxygenase HppD. New product name confidence: Class 1. New homology: 99% identity to HppD [B. cenocepacia J2315]. New evidence reference (PMID): 17933889.
|
Literature review. Based on article by Valvano, M. A. University of Western Ontario, London, Ontario.
|
| Sep 15, 2008 |
Bcen_3644
|
|
New gene name: mgtC. New homology: 94% identity to MgtC [B. cenocepacia J2315]. New evidence reference (PMID): 16988222.
|
Literature review. Based on article by Valvano, M. A. University of Western Ontario, London, Ontario.
|
| Sep 15, 2008 |
Bcen2424_0321
|
|
New gene name: hppD. New product name: 4-hydroxyphenylpyruvic acid dioxygenase HppD. New product name confidence: Class 1. New homology: 99% identity to HppD [B. cenocepacia J2315]. New evidence reference (PMID): 17933889.
|
Literature review. Based on article by Valvano, M. A. University of Western Ontario, London, Ontario.
|
| Sep 15, 2008 |
Bcen2424_2434
|
|
New gene name: sodC. New product name: superoxide dismutase, copper/zinc binding SodC. New product name confidence: Class 1. New subcellular localization confidence: Class 1. New evidence reference (PMID): 17325048.
|
Literature review. Based on article by Valvano, M. A. University of Western Ontario, London, Ontario.
|
| Sep 15, 2008 |
Bcen2424_2791
|
|
New gene name: rpoN. New product name confidence: Class 1. New homology: 91% identity to RpoN [B. cenocepacia J2315]. New evidence reference (PMID): 18195023.
|
Literature review. Based on article by Valvano, M. A. University of Western Ontario, London, Ontario.
|
| Sep 15, 2008 |
Bcen2424_4723
|
|
New gene name: mgtC. New homology: 94% identity to MgtC [B. cenocepacia J2315]. New evidence reference (PMID): 16988222.
|
Literature review. Based on article by Valvano, M. A. University of Western Ontario, London, Ontario.
|
| Sep 15, 2008 |
Bcenmc03_0301
|
Burkholderia cenocepacia
MC0-3 |
New gene name: hppD. New product name: 4-hydroxyphenylpyruvic acid dioxygenase HppD. New product name confidence: Class 1. New homology: 99% identity to HppD [B. cenocepacia J2315]. New evidence reference (PMID): 17933889.
|
Literature review. Based on article by Valvano, M. A. University of Western Ontario, London, Ontario.
|
| Sep 15, 2008 |
Bcenmc03_5577
|
Burkholderia cenocepacia
MC0-3 |
New gene name: mgtC. New homology: 94% identity to MgtC [B. cenocepacia J2315]. New evidence reference (PMID): 16988222.
|
Literature review. Based on article by Valvano, M. A. University of Western Ontario, London, Ontario.
|
| Sep 15, 2008 |
Bcep1808_0303
|
Burkholderia vietnamiensis
G4 |
New gene name: hppD. New product name: 4-hydroxyphenylpyruvic acid dioxygenase HppD. New product name confidence: Class 1. New homology: 96% identity to HppD [B. cenocepacia J2315]. New evidence reference (PMID): 17933889.
|
Literature review. Based on article by Valvano, M. A. University of Western Ontario, London, Ontario.
|
| Sep 15, 2008 |
Bcep1808_2896
|
Burkholderia vietnamiensis
G4 |
New product name confidence: Class 1. New homology: 89% identity to RpoN [B. cenocepacia J2315]. New evidence reference (PMID): 18195023.
|
Literature review. Based on article by Valvano, M. A. University of Western Ontario, London, Ontario.
|
| Sep 15, 2008 |
Bcep1808_5259
|
Burkholderia vietnamiensis
G4 |
New gene name: mgtC. New homology: 91% identity to MgtC [B. cenocepacia J2315]. New evidence reference (PMID): 16988222.
|
Literature review. Based on article by Valvano, M. A. University of Western Ontario, London, Ontario.
|
| Sep 15, 2008 |
Bcep18194_A3420
|
|
New gene name: hppD. New product name: 4-hydroxyphenylpyruvic acid dioxygenase HppD. New product name confidence: Class 1. New homology: 97% identity to HppD [B. cenocepacia J2315]. New evidence reference (PMID): 17933889.
|
Literature review. Based on article by Valvano, M. A. University of Western Ontario, London, Ontario.
|
| Sep 15, 2008 |
Bcep18194_A5765
|
|
New gene name: sodC. New product name: superoxide dismutase, copper/zinc binding SodC. New product name confidence: Class 1. New subcellular localization confidence: Class 1. New evidence reference (PMID): 17325048.
|
Literature review. Based on article by Valvano, M. A. University of Western Ontario, London, Ontario.
|
| Sep 15, 2008 |
Bcep18194_A6121
|
|
New gene name: rpoN. New product name confidence: Class 1. New homology: 91% identity to RpoN [B. cenocepacia J2315]. New evidence reference (PMID): 18195023.
|
Literature review. Based on article by Valvano, M. A. University of Western Ontario, London, Ontario.
|
| Sep 15, 2008 |
Bcep18194_B1053
|
|
New gene name: mgtC. New homology: 92% identity to MgtC [B. cenocepacia J2315]. New evidence reference (PMID): 16988222.
|
Literature review. Based on article by Valvano, M. A. University of Western Ontario, London, Ontario.
|
| Sep 15, 2008 |
Bamb_0240
|
|
New gene name: hppD. New product name: 4-hydroxyphenylpyruvic acid dioxygenase HppD. New product name confidence: Class 1. New homology: 96% identity to HppD [B. cenocepacia J2315]. New evidence reference (PMID): 17933889.
|
Literature review. Based on article by Valvano, M. A. University of Western Ontario, London, Ontario.
|
| Sep 15, 2008 |
Bamb_2851
|
|
New gene name: rpoN. New product name confidence: Class 1. New homology: 89% identity to RpoN [B. cenocepacia J2315]. New evidence reference (PMID): 18195023.
|
Literature review. Based on article by Valvano, M. A. University of Western Ontario, London, Ontario.
|