Burkholderia vietnamiensis G4, Bcep1808_2896

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia vietnamiensis G4
GCF_000016205.1|latest
Locus Tag
Bcep1808_2896
NCBI Locus TagBCEP1808_RS14510
Name
Replicon chromosome 1
Genomic location 3209312 - 3210817 (+ strand)

Cross-References

RefSeq WP_011886056.1
GI 134296987
Entrez 4954641
GI 134296987
NCBI Locus Tag BCEP1808_RS14510
NCBI Old Locus Tag Bcep1808_2896
RefSeq WP_011886056.1
UniProtKB Acc A4JHY4
UniProtKB ID A4JHY4_BURVG

Product

Feature Type CDS
Coding Frame 1
Product Name
RNA polymerase factor sigma-54
Product Name Confidence: Class 1
Synonyms
Evidence for Translation
Charge (pH 7) -15.10
Kyte-Doolittle Hydrophobicity Value -0.263
Molecular Weight (kDa) 54798.2
Isoelectric Point (pI) 4.82

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 397 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG002642 (655 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Bcep1808_2896

Human Homologs

References

Burkholderia cenocepacia requires the RpoN sigma factor for biofilm formation and intracellular trafficking within macrophages.
Saldías MS, Lamothe J, Wu R, Valvano MA
Infect Immun 2008 Mar;76(3):1059-67
PubMed ID: 18195023