Strain |
Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest |
Locus Tag |
BPSS0879
|
Name |
|
Replicon | chromosome 2 |
Genomic location | 1172547 - 1173671 (+ strand) |
RefSeq | YP_110888.1 |
GI | 53721903 |
Entrez | 3096508 |
GI | 53721903 |
INSDC | CAH38341.1 |
NCBI Locus Tag | BPSS0879 |
RefSeq | YP_110888.1,GeneID |
UniParc | UPI000043BAAC |
UniProtKB Acc | Q63LY3 |
UniProtKB ID | Q63LY3_BURPS |
UniRef100 | UniRef100_Q3JFM7 |
UniRef50 | UniRef50_Q3JPT3 |
UniRef90 | UniRef90_A3MD10 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
porin protein
|
Synonyms | |
Evidence for Translation |
Detected in B. pseudomallei strain DD503 using trypsin shaving and mass spectrometry (PMID:21391724). Found in at least two preparations.
|
Charge (pH 7) | 8.93 |
Kyte-Doolittle Hydrophobicity Value | -0.303 |
Molecular Weight (kDa) | 39178.6 |
Isoelectric Point (pI) | 9.71 |
Individual Mappings | |
Additional evidence for subcellular localization |
Detected in Triton-insoluble fraction of lysozyme-treated B. pseudomallei DD503 cells using trypsin shaving and mass spectrometry (PMID:21391724).
|
Identified using the Resistance Gene Identifier (RGI)
Model Name | Definition | Accession | Model Type (?) | SNP | Cutoff | Bit Score | Percent Identity | CARD Version |
Burkholderia pseudomallei Omp38 | Heterologous expression of Burkholderia pseudomallei Omp38 (BpsOmp38) in Omp-deficient E. coli host cells lowers their permeability and in consequence, their antimicrobial susceptibility to penicillin G, cefoxitin, ceftazidime and imipenem. | ARO:3004123 | protein homolog model | Strict | 0.0 | 99.47 | 1.2.1 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 60 genera
|
Burkholderia Ortholog Group |
BG003726 (651 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: BPSS0879
Search term: porin protein
|
Quantitative proteomic analysis of Burkholderia pseudomallei Bsa type III secretion system effectors using hypersecreting mutants.
Vander Broek CW, Chalmers KJ, Stevens MP, Stevens JM
Mol Cell Proteomics 2015 Apr;14(4):905-16
PubMed ID: 25635268
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