| Apr 30, 2018 |
BCAL2402
|
Burkholderia cenocepacia
J2315 |
New PubMed ID: 19525227. New comment:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 22, 2009 |
BCAL2360
|
Burkholderia cenocepacia
J2315 |
New gene name: ecfD. New product name: sigma factor 70 EcfD. New product name confidence: Class 1. New evidence reference (PMID): 17784948.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
| Apr 20, 2020 |
BCAL2309
|
Burkholderia cenocepacia
J2315 |
New gene name: cueR. New product name: CueR. New product name confidence: Class 2. Name transferred from: UniProtKB:P0A9G4. New PMID: 32090500.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAL2297
|
Burkholderia cenocepacia
J2315 |
New gene name: hemP. New product name: Hemin uptake protein HemP. New product name confidence: Class 2. New PubMed ID: 28625994. New comment: .Annotation transferred from: BGD:Bmul_1072.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL2248
|
Burkholderia cenocepacia
J2315 |
New product name: Group I Sfp-type phosphopantetheinyl transferase, PobA. New gene name: pobA. New product name confidence: Class 1. New pathway: pyochelin and ornibactin biosynthesis. New GO Accession: GO:0033212(IMP). New PubMed reference: 20966087.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL2248
|
Burkholderia cenocepacia
J2315 |
New gene name: pobA. New product name: Group I Sfp-type phosphopantetheinyl transferase, PobA. New product name confidence: Class 1. New pathway: pyochelin and ornibactin biosynthesis. New GO accession: GO:0033212 [IMP]. New evidence reference (PMID): 20966087.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAL2200
|
Burkholderia cenocepacia
J2315 |
New gene name: bptpA. New product name: Burkholderia phosphotyrosine phosphatase, BPtpA. New product name synonym: Low molecular weight protein tyrosine phosphatase, class II.I. New product name confidence: Class 1. New PMID: 31978399.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAL2157
|
Burkholderia cenocepacia
J2315 |
New product name: SuhB. New product name confidence: Class 1. New GO Accession: GO:0015628(IMP). New GO Accession: GO:0033103(IMP). New GO Accession: GO:0071978(IMP). New GO Accession: GO:0044010(IMP). New GO Accession: GO:0046677(IMP). New PubMed reference: 22767545.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAL2154
|
Burkholderia cenocepacia
J2315 |
New gene name: lpxH. New product name confidence: Class 2. New PubMed ID: 28085228. New comment: .Annotation transferred from: UniProtKB:P43341.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAL2081
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New PubMed ID: 15610978. New comment: .Annotation transferred from: UniProtKB:P21645.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAL2079
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New PubMed ID: 15610978. New comment: .Annotation transferred from: UniProtKB:P0A722.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAL2078
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New PubMed ID: 15610978. New comment: .Annotation transferred from: UniProtKB:P10441.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 14, 2010 |
BCAL2021
|
Burkholderia cenocepacia
J2315 |
New product name: Class A penicillin-binding protein. New product name confidence: Class 1. New evidence reference (PMID): 19924480.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 22, 2009 |
BCAL1947
|
Burkholderia cenocepacia
J2315 |
New gene name: ecfG. New product name: sigma factor 70 EcfG. New product name confidence: Class 2. New evidence reference (PMID): 17784948.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
| Jan 25, 2011 |
BCAL1935
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: lipid A modification. New GO Accession: GO:0009245(ISS). New PubMed reference: 17337576. New genomic context: putative aminoarabinose (Ara4N) biosynthesis gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAL1935
|
Burkholderia cenocepacia
J2315 |
New PubMed ID: 27597847. New comment: In PMID:27597847: arnT, arnB, arnC, arnA1, arnA2, and BCAL1935 located in the arn gene cluster harbored significantly low frequencies of transposon insertions (TraDIS). They were therefore categorized as essential by the authors.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1935
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: lipid A modification. New GO accession: GO:0009245 [ISS]. New evidence reference (PMID): 17337576. New genomic context: putative aminoarabinose (Ara4N) biosynthesis gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1934
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: lipid A modification. New GO Accession: GO:0009245(ISS). New PubMed reference: 17337576. New genomic context: putative aminoarabinose (Ara4N) biosynthesis gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAL1934
|
Burkholderia cenocepacia
J2315 |
New PubMed ID: 22742453. New PubMed ID: 15809294. New PubMed ID: 17337576. New PubMed ID: 27597847. New comment: In PMID:27597847: arnT, arnB, arnC, arnA1, arnA2, and BCAL1935 located in the arn gene cluster harbored significantly low frequencies of transposon insertions (TraDIS). They were therefore categorized as essential by the authors.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1934
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: lipid A modification. New GO accession: GO:0009245 [ISS]. New evidence reference (PMID): 17337576. New genomic context: putative aminoarabinose (Ara4N) biosynthesis gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 10, 2015 |
BCAL1934
|
Burkholderia cenocepacia
J2315 |
New gene name: arnA2. New product name: putative UDP-4′-keto-5′-carboxypentose decarboxylase. New product name confidence: Class 2.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1933
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: lipid A modification. New GO Accession: GO:0009245(ISS). New PubMed reference: 17337576. New genomic context: putative aminoarabinose (Ara4N) biosynthesis gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAL1933
|
Burkholderia cenocepacia
J2315 |
New PubMed ID: 22742453. New PubMed ID: 15809294. New PubMed ID: 17337576. New PubMed ID: 27597847. New comment: In PMID:27597847: arnT, arnB, arnC, arnA1, arnA2, and BCAL1935 located in the arn gene cluster harbored significantly low frequencies of transposon insertions (TraDIS). They were therefore categorized as essential by the authors.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1933
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: lipid A modification. New GO accession: GO:0009245 [ISS]. New evidence reference (PMID): 17337576. New genomic context: putative aminoarabinose (Ara4N) biosynthesis gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 10, 2015 |
BCAL1933
|
Burkholderia cenocepacia
J2315 |
New gene name: arnA1. New product name: putative UDP-4-deoxy-4-formamido-l-arabinose formyltransferase. New product name confidence: Class 2.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1932
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: lipid A modification. New GO Accession: GO:0009245(ISS). New PubMed reference: 17337576. New genomic context: putative aminoarabinose (Ara4N) biosynthesis gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAL1932
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New PubMed ID: 22742453. New PubMed ID: 17337576. New PubMed ID: 27597847. New comment: In PMID:27597847: arnT, arnB, arnC, arnA1, arnA2, and BCAL1935 located in the arn gene cluster harbored significantly low frequencies of transposon insertions (TraDIS). They were therefore categorized as essential by the authors.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1932
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: lipid A modification. New GO accession: GO:0009245 [ISS]. New evidence reference (PMID): 17337576. New genomic context: putative aminoarabinose (Ara4N) biosynthesis gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 10, 2015 |
BCAL1932
|
Burkholderia cenocepacia
J2315 |
New gene name: arnC. New product name: Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1931
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: lipid A modification. New GO Accession: GO:0009245(ISS). New PubMed reference: 17337576. New genomic context: putative aminoarabinose (Ara4N) biosynthesis gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAL1931
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New PubMed ID: 22742453. New PubMed ID: 17337576. New PubMed ID: 27597847. New comment: In PMID:27597847: arnT, arnB, arnC, arnA1, arnA2, and BCAL1935 located in the arn gene cluster harbored significantly low frequencies of transposon insertions (TraDIS). They were therefore categorized as essential by the authors.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1931
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: lipid A modification. New GO accession: GO:0009245 [ISS]. New evidence reference (PMID): 17337576. New genomic context: putative aminoarabinose (Ara4N) biosynthesis gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1930
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: lipid A modification. New GO Accession: GO:0009245(ISS). New PubMed reference: 17337576. New genomic context: putative aminoarabinose (Ara4N) biosynthesis gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1930
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: lipid A modification. New GO accession: GO:0009245 [ISS]. New evidence reference (PMID): 17337576. New genomic context: putative aminoarabinose (Ara4N) biosynthesis gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1929
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: lipid A modification. New GO Accession: GO:0009245(ISS). New PubMed reference: 17337576. New genomic context: putative aminoarabinose (Ara4N) biosynthesis gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAL1929
|
Burkholderia cenocepacia
J2315 |
New product name: 4-amino-4-deoxy-L-arabinose transferase ArnT. New product name confidence: Class 1. New subcellular localization: Cytoplasmic membrane (Class 1). New subcellular localization evidence code (ECO): ECO:0000314. New subcellular localization PMID: 26030265. New PubMed ID: 22742453. New PubMed ID: 26515403. New PubMed ID: 26030265. New PubMed ID: 11535604. New PubMed ID: 17337576. New PubMed ID: 27597847. New comment: In PMID:27597847: arnT, arnB, arnC, arnA1, arnA2, and BCAL1935 located in the arn gene cluster harbored significantly low frequencies of transposon insertions (TraDIS). They were therefore categorized as essential by the authors.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1929
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: lipid A modification. New GO accession: GO:0009245 [ISS]. New evidence reference (PMID): 17337576. New genomic context: putative aminoarabinose (Ara4N) biosynthesis gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 10, 2015 |
BCAL1929
|
Burkholderia cenocepacia
J2315 |
New gene name: arnT. New product name: aminoarabinose transferase.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 22, 2009 |
BCAL1892
|
Burkholderia cenocepacia
J2315 |
New gene name: sigL. New product name: sigma factor 70 SigL. New product name confidence: Class 1. New evidence reference (PMID): 17784948.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
| Feb 4, 2013 |
BCAL1879
|
Burkholderia cenocepacia
J2315 |
New product name: Hfq. New product name confidence: Class 1. New GO Accession: GO:0006979(IPI). New GO Accession: GO:0003723(EXP). New PubMed reference: 21278292. New PubMed reference: 19942656. New PubMed reference: 23142676.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1702
|
Burkholderia cenocepacia
J2315 |
New pathway: ornibactin biosynthesis and transport. New GO Accession: GO:0033212(IGC). New PubMed reference: 16672617. New genomic context: ornibactin gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1702
|
Burkholderia cenocepacia
J2315 |
New pathway: ornibactin biosynthesis and transport. New GO accession: GO:0033212 [IGC]. New evidence reference (PMID): 16672617. New genomic context: ornibactin gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1701
|
Burkholderia cenocepacia
J2315 |
New pathway: ornibactin biosynthesis and transport. New GO Accession: GO:0033212(IGC). New PubMed reference: 16672617. New genomic context: ornibactin gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1701
|
Burkholderia cenocepacia
J2315 |
New pathway: ornibactin biosynthesis and transport. New GO accession: GO:0033212 [IGC]. New evidence reference (PMID): 16672617. New genomic context: ornibactin gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAL1700
|
Burkholderia cenocepacia
J2315 |
New GO Accession: GO:0042927(IMP). New GO Accession: GO:0015891(IMP). New PubMed reference: 11083764.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1700
|
Burkholderia cenocepacia
J2315 |
New pathway: ornibactin biosynthesis and transport. New GO Accession: GO:0033212(IGC). New PubMed reference: 16672617. New genomic context: ornibactin gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 29, 2010 |
BCAL1700
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New subcellular localization: Outer Membrane. New subcellular localization confidence: Class 1. New evidence reference (PMID): 10456885. New evidence reference (PMID): 11083760.
|
Pamela A. Sokol, University of Calgary
|
| Jan 25, 2011 |
BCAL1700
|
Burkholderia cenocepacia
J2315 |
New pathway: ornibactin biosynthesis and transport. New GO accession: GO:0033212 [IGC]. New evidence reference (PMID): 16672617. New genomic context: ornibactin gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1699
|
Burkholderia cenocepacia
J2315 |
New pathway: ornibactin biosynthesis and transport. New GO Accession: GO:0033212(IGC). New PubMed reference: 16672617. New genomic context: ornibactin gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 29, 2010 |
BCAL1699
|
Burkholderia cenocepacia
J2315 |
New product name: L-ornithine N(5)-oxygenase. New product name confidence: Class 1. New evidence reference (PMID): 10456885.
|
Pamela A. Sokol, University of Calgary
|
| Apr 10, 2015 |
BCAL1699
|
Burkholderia cenocepacia
J2315 |
New product name: L-ornithine 5-monooxygenase.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1699
|
Burkholderia cenocepacia
J2315 |
New pathway: ornibactin biosynthesis and transport. New GO accession: GO:0033212 [IGC]. New evidence reference (PMID): 16672617. New genomic context: ornibactin gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1698
|
Burkholderia cenocepacia
J2315 |
New pathway: ornibactin biosynthesis and transport. New GO Accession: GO:0033212(IGC). New PubMed reference: 16672617. New genomic context: ornibactin gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1698
|
Burkholderia cenocepacia
J2315 |
New pathway: ornibactin biosynthesis and transport. New GO accession: GO:0033212 [IGC]. New evidence reference (PMID): 16672617. New genomic context: ornibactin gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAL1697
|
Burkholderia cenocepacia
J2315 |
New GO Accession: GO:0019290(IMP).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1697
|
Burkholderia cenocepacia
J2315 |
New pathway: ornibactin biosynthesis and transport. New GO Accession: GO:0033212(IMP). New PubMed reference: 16672617. New genomic context: ornibactin gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1697
|
Burkholderia cenocepacia
J2315 |
New pathway: ornibactin biosynthesis and transport. New GO accession: GO:0033212 [IMP]. New evidence reference (PMID): 16672617. New genomic context: ornibactin gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAL1696
|
Burkholderia cenocepacia
J2315 |
New GO Accession: GO:0019290(IMP).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1696
|
Burkholderia cenocepacia
J2315 |
New pathway: ornibactin biosynthesis and transport. New GO Accession: GO:0033212(IMP). New PubMed reference: 16672617. New genomic context: ornibactin gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1696
|
Burkholderia cenocepacia
J2315 |
New pathway: ornibactin biosynthesis and transport. New GO accession: GO:0033212 [IMP]. New evidence reference (PMID): 16672617. New genomic context: ornibactin gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1695
|
Burkholderia cenocepacia
J2315 |
New pathway: ornibactin biosynthesis and transport. New GO Accession: GO:0033212(IGC). New PubMed reference: 16672617. New genomic context: ornibactin gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1695
|
Burkholderia cenocepacia
J2315 |
New pathway: ornibactin biosynthesis and transport. New GO accession: GO:0033212 [IGC]. New evidence reference (PMID): 16672617. New genomic context: ornibactin gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1694
|
Burkholderia cenocepacia
J2315 |
New pathway: ornibactin biosynthesis and transport. New GO Accession: GO:0033212(IGC). New PubMed reference: 16672617. New genomic context: ornibactin gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1694
|
Burkholderia cenocepacia
J2315 |
New pathway: ornibactin biosynthesis and transport. New GO accession: GO:0033212 [IGC]. New evidence reference (PMID): 16672617. New genomic context: ornibactin gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1693
|
Burkholderia cenocepacia
J2315 |
New pathway: ornibactin biosynthesis and transport. New GO Accession: GO:0033212(IGC). New PubMed reference: 16672617. New genomic context: ornibactin gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1693
|
Burkholderia cenocepacia
J2315 |
New pathway: ornibactin biosynthesis and transport. New GO accession: GO:0033212 [IGC]. New evidence reference (PMID): 16672617. New genomic context: ornibactin gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1692
|
Burkholderia cenocepacia
J2315 |
New pathway: ornibactin biosynthesis and transport. New GO Accession: GO:0033212(IGC). New PubMed reference: 16672617. New genomic context: ornibactin gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1692
|
Burkholderia cenocepacia
J2315 |
New pathway: ornibactin biosynthesis and transport. New GO accession: GO:0033212 [IGC]. New evidence reference (PMID): 16672617. New genomic context: ornibactin gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1691
|
Burkholderia cenocepacia
J2315 |
New pathway: ornibactin biosynthesis and transport. New GO Accession: GO:0033212(IGC). New PubMed reference: 16672617. New genomic context: ornibactin gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1691
|
Burkholderia cenocepacia
J2315 |
New pathway: ornibactin biosynthesis and transport. New GO accession: GO:0033212 [IGC]. New evidence reference (PMID): 16672617. New genomic context: ornibactin gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1690
|
Burkholderia cenocepacia
J2315 |
New pathway: ornibactin biosynthesis and transport. New GO Accession: GO:0033212(IGC). New PubMed reference: 16672617. New genomic context: ornibactin gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1690
|
Burkholderia cenocepacia
J2315 |
New pathway: ornibactin biosynthesis and transport. New GO accession: GO:0033212 [IGC]. New evidence reference (PMID): 16672617. New genomic context: ornibactin gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1689
|
Burkholderia cenocepacia
J2315 |
New pathway: ornibactin biosynthesis and transport. New GO Accession: GO:0033212(IGC). New PubMed reference: 16672617. New genomic context: ornibactin gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1689
|
Burkholderia cenocepacia
J2315 |
New pathway: ornibactin biosynthesis and transport. New GO accession: GO:0033212 [IGC]. New evidence reference (PMID): 16672617. New genomic context: ornibactin gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1688
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New pathway: ornibactin biosynthesis and transport. New GO Accession: GO:0033212(IMP). New PubMed reference: 16672617. New genomic context: ornibactin gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAL1688
|
Burkholderia cenocepacia
J2315 |
New GO Accession: GO:1900704(IMP).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 10, 2015 |
BCAL1688
|
Burkholderia cenocepacia
J2315 |
New PubMed ID: 16672617. New genomic context: ornibactin gene cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1688
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New pathway: ornibactin biosynthesis and transport. New GO accession: GO:0033212 [IMP]. New evidence reference (PMID): 16672617. New genomic context: ornibactin gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 22, 2009 |
BCAL1688
|
Burkholderia cenocepacia
J2315 |
New gene name: ecfI. New product name: sigma factor 70 EcfI. New product name confidence: Class 2. New evidence reference (PMID): 17784978.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
| Feb 4, 2013 |
BCAL1676
|
Burkholderia cenocepacia
J2315 |
New GO Accession: GO:0071236(EXP). New PubMed reference: 19761586.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAL1676
|
Burkholderia cenocepacia
J2315 |
New product name: RND-3 efflux system outer membrane protein. New product name confidence: Class 1. New comment: Member of rnd-3 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-3; ; Major RND-3 substrates are nalidixic acid, ciprofloxacin, tobramycin, chlorhexidine. New PMIDs: 19761586, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAL1675
|
Burkholderia cenocepacia
J2315 |
New GO Accession: GO:0071236(EXP). New PubMed reference: 19761586.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAL1675
|
Burkholderia cenocepacia
J2315 |
New product name: RND-3 efflux system transporter protein. New product name confidence: Class 1. New comment: Member of rnd-3 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-3; ; Major RND-3 substrates are nalidixic acid, ciprofloxacin, tobramycin, chlorhexidine. New PMIDs: 19761586, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAL1674
|
Burkholderia cenocepacia
J2315 |
New GO Accession: GO:0071236(EXP). New PubMed reference: 19761586.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAL1674
|
Burkholderia cenocepacia
J2315 |
New product name: RND-3 efflux system membrane fusion protein. New product name confidence: Class 1. New comment: Member of rnd-3 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-3; ; Major RND-3 substrates are nalidixic acid, ciprofloxacin, tobramycin, chlorhexidine. New PMIDs: 19761586, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAL1672
|
|
New GO Accession: GO:0071236(EXP). New PubMed reference: 19761586.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAL1656
|
Burkholderia cenocepacia
J2315 |
New GO Accession: GO:0051176(IMP). New PubMed reference: 16997956.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 22, 2009 |
BCAL1656
|
Burkholderia cenocepacia
J2315 |
New product name: transcription factor SsuR. New product name confidence: Class 1. New evidence reference (PMID): 16997956.
|
Literature review. Hryniewicz, M. M. Polish academy of Sciences, Warsaw, Poland
|
| Feb 4, 2013 |
BCAL1538
|
Burkholderia cenocepacia
J2315 |
New product name: Hfq2. New gene name: hfq2. New product name confidence: Class 1. New GO Accession: GO:0006979(IPI). New GO Accession: GO:0003723(EXP). New GO Accession: GO:0003677(). New PubMed reference: 21278292. New PubMed reference: 19942656. New PubMed reference: 23142676.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 10, 2015 |
BCAL1536
|
Burkholderia cenocepacia
J2315 |
New gene name: rpoN. New product name: alternative sigma factor RpoN. New product name confidence: Class 1. New PubMed ID: 15213146. New PubMed ID: 18195023.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 22, 2009 |
BCAL1369
|
Burkholderia cenocepacia
J2315 |
New gene name: ecfC. New product name: sigma factor 70 EcfC. New product name confidence: Class 1. New evidence reference (PMID): 17784948.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
| Feb 4, 2013 |
BCAL0998
|
Burkholderia cenocepacia
J2315 |
New GO Accession: GO:0006979(IMP). New PubMed reference: 18227267.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 22, 2009 |
BCAL0998
|
Burkholderia cenocepacia
J2315 |
New gene name: ecfA1. New product name: EcfA1. New product name confidence: Class 1. New evidence reference (PMID): 17784948.
|
Literature review. Raymond C. Lo, Simon Fraser University
|
| Apr 10, 2015 |
BCAL0995
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New PubMed ID: 18771721.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAL0967
|
Burkholderia cenocepacia
J2315 |
New product name: heptosyltransferase II WaaF. New PubMed ID: 19525227. New comment:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL0967
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO Accession: GO:0009244(IMP). New PubMed reference: 19525227. New PubMed reference: 10543742.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL0967
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO accession: GO:0009244 [IMP]. New evidence reference (PMID): 19525227. New evidence reference (PMID): 10543742.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAL0909
|
Burkholderia cenocepacia
J2315 |
New gene name: ybeY. New product name: rRNA maturation RNAse YbeY. New product name confidence: Class 2. New PubMed ID: 20807199. New PubMed ID: 23638028. New PubMed ID: 19181801. New comment: .Annotation transferred from: UniprotKB:P0A898.
|
Bart Devreese. Ghent University, Belgium
|
| Feb 4, 2013 |
BCAL0813
|
Burkholderia cenocepacia
J2315 |
New GO Accession: GO:2000147(IMP). New PubMed reference: 18195023.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 22, 2009 |
BCAL0813
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 1. New evidence reference (PMID): 18195023.
|
Literature review. Valvano, M. A. University of Western Ontario, London, Ontario
|