Burkholderia cenocepacia J2315, BCAL1932 (arnC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia cenocepacia J2315
GCF_000009485.1|latest
Locus Tag
BCAL1932
NCBI Locus TagQU43_RS46205
Name
arnC
Replicon chromosome 1
Genomic location 2131793 - 2132830 (+ strand)
CommentIn PMID:27597847: arnT, arnB, arnC, arnA1, arnA2, and BCAL1935 located in the arn gene cluster harbored significantly low frequencies of transposon insertions (TraDIS). They were therefore categorized as essential by the authors.

Cross-References

RefSeq WP_006482860.1
GI 206560296
Entrez 6933310
GI 206560296
INSDC CAR52233.1
NCBI Locus Tag QU43_RS46205
NCBI Old Locus Tag BCAL1932
RefSeq WP_006482860.1,GeneID
UniParc UPI00017B9221
UniProtKB Acc B4EB18
UniProtKB ID B4EB18_BURCJ
UniRef100 UniRef100_A0A0D1D8J9
UniRef50 UniRef50_Q8XZS4
UniRef90 UniRef90_A0A095DZ33

Product

Feature Type CDS
Coding Frame 1
Product Name
Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
Product Name Confidence: Class 1
Synonyms putative undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase
Evidence for Translation
Charge (pH 7) 1.62
Kyte-Doolittle Hydrophobicity Value 0.113
Molecular Weight (kDa) 38426.0
Isoelectric Point (pI) 7.69

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 548 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG001694 (652 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BCAL1932
Search term: arnC

References

A putative gene cluster for aminoarabinose biosynthesis is essential for Burkholderia cenocepacia viability.
Ortega XP, Cardona ST, Brown AR, Loutet SA, Flannagan RS, Campopiano DJ, Govan JR, Valvano MA
J Bacteriol 2007 May;189(9):3639-44
PubMed ID: 17337576
PubMed ID: 22742453
Candidate Essential Genes in Burkholderia cenocepacia J2315 Identified by Genome-Wide TraDIS.
Wong YC, Abd El Ghany M, Naeem R, Lee KW, Tan YC, Pain A, Nathan S
Front Microbiol 2016;7:1288
PubMed ID: 27597847