Log of Annotation Updates

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Date Locus Tag Strain Description Submitter
Apr 30, 2018 BPSS1517 Burkholderia pseudomallei K96243 New product name: putative type III secretion system chaperone protein (T3SS-3). New PubMed ID: 22092682. New PubMed ID: 28664152. New comment: This gene is part of the type III secretion system T3SS-3 (bsa) gene locus. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Feb 4, 2013 BPSS1516 Burkholderia pseudomallei K96243 New product name: BopC. New gene name: bopC. New product name confidence: Class 1. New subcellular localization: Extracellular. New subcellular localization confidence: Class 1. New GO Accession: GO:0030254(IDA). New PubMed reference: 22092682. Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
Apr 10, 2015 BPSS1516 Burkholderia pseudomallei K96243 New PubMed ID: 20951592. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1516 Burkholderia pseudomallei K96243 New product name: type III secretion system effector BopC (T3SS-3). New PubMed ID: 25635268. New PubMed ID: 22092682. New PubMed ID: 21670170. New PubMed ID: 28664152. New comment: This gene is part of the type III secretion system T3SS-3 (bsa) gene locus. bopC is also necessary for T6SS-1 function in macrophages (PMID: 21670170). Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1514 Burkholderia pseudomallei K96243 New gene name: bopB. New product name: putative type III secretion system effector BopB. New product name confidence: Class 2. New PubMed ID: 24809950. New PubMed ID: 15289563. New PubMed ID: 25085508. New comment: Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1512 Burkholderia pseudomallei K96243 New product name: deubiquitinase TssM. New subcellular localization: Extracellular (Class 1). New subcellular localization evidence code (ECO): ECO:0000112. New subcellular localization PMID: 24866793. New PubMed ID: 19168747. New PubMed ID: 24866793. New comment: Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS1512 Burkholderia pseudomallei K96243 New gene name: tssM. New product name confidence: Class 1. New PubMed ID: 24866793. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS1511 Burkholderia pseudomallei K96243 New gene name: tssM-5. New product name confidence: Class 2. New PubMed ID: 17660433. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1511 Burkholderia pseudomallei K96243 New product name: type VI secretion system protein TssM-5 . New product name confidence: Class 1. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-5 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-1 cluster later (PMID:21670170, PMID:22007185) and by the B. mallei literature (PMID:22892068, PMID:17555434). Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS1510 Burkholderia pseudomallei K96243 New gene name: tssL-5. New product name confidence: Class 2. New PubMed ID: 17660433. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1510 Burkholderia pseudomallei K96243 New product name: type VI secretion system protein TssL-5. New product name confidence: Class 1. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-5 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-1 cluster later (PMID:21670170, PMID:22007185) and by the B. mallei literature (PMID:22892068, PMID:17555434). Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS1509 Burkholderia pseudomallei K96243 New gene name: tssK-5. New product name confidence: Class 2. New PubMed ID: 17660433. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1509 Burkholderia pseudomallei K96243 New product name: type VI secretion system protein TssK-5. New product name confidence: Class 1. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New PubMed ID: 20865170. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-5 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-1 cluster later (PMID:21670170, PMID:22007185) and by the B. mallei literature (PMID:22892068, PMID:17555434). Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS1508 Burkholderia pseudomallei K96243 New gene name: tssJ-5. New product name confidence: Class 2. New PubMed ID: 17660433. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1508 Burkholderia pseudomallei K96243 New product name: type VI secretion system protein TssJ-5. New product name confidence: Class 1. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-5 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-1 cluster later (PMID:21670170, PMID:22007185) and by the B. mallei literature (PMID:22892068, PMID:17555434). Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS1507 Burkholderia pseudomallei K96243 New gene name: tagD-5. New product name confidence: Class 2. New PubMed ID: 17660433. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1507 Burkholderia pseudomallei K96243 New product name: type VI secretion system-associated protein TagD-5. New product name confidence: Class 1. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-5 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-1 cluster later (PMID:21670170, PMID:22007185) and by the B. mallei literature (PMID:22892068, PMID:17555434). Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS1506 Burkholderia pseudomallei K96243 New gene name: tagC-5. New product name confidence: Class 2. New PubMed ID: 17660433. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1506 Burkholderia pseudomallei K96243 New product name: type VI secretion system-associated protein TagC-5. New product name confidence: Class 1. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-5 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-1 cluster later (PMID:21670170, PMID:22007185) and by the B. mallei literature (PMID:22892068, PMID:17555434). Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS1505 Burkholderia pseudomallei K96243 New gene name: tagB-5. New product name confidence: Class 2. New PubMed ID: 17660433. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1505 Burkholderia pseudomallei K96243 New product name: type VI secretion system-associated protein TagB-5. New product name confidence: Class 1. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-5 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-1 cluster later (PMID:21670170, PMID:22007185) and by the B. mallei literature (PMID:22892068, PMID:17555434). Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS1504 Burkholderia pseudomallei K96243 New gene name: tagAB-5. New product name confidence: Class 2. New PubMed ID: 17660433. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1504 Burkholderia pseudomallei K96243 New product name: type VI secretion system-associated protein TagAB-5. New product name confidence: Class 1. New PubMed ID: 17660433. New PubMed ID: 24595140. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-5 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-1 cluster later (PMID:21670170, PMID:22007185) and by the B. mallei literature (PMID:22892068, PMID:17555434). Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS1503 Burkholderia pseudomallei K96243 New gene name: tssI-5. New product name confidence: Class 2. New PubMed ID: 17660433. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1503 Burkholderia pseudomallei K96243 New product name: type VI secretion protein TssI-5. New gene name synonym: vgrG-5. New product name confidence: Class 1. New subcellular localization: Extracellular (Class 1). New subcellular localization evidence code (ECO): ECO:000123. New subcellular localization PMID: 24452686. New PubMed ID: 24452686. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-5 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-1 cluster later (PMID:21670170, PMID:22007185) and by the B. mallei literature (PMID:22892068, PMID:17555434). Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS1502 Burkholderia pseudomallei K96243 New gene name: tssH-5. New product name confidence: Class 2. New PubMed ID: 17660433. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS1502 Burkholderia pseudomallei K96243 New product name: TssH-5. New product name confidence: Class 1. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1502 Burkholderia pseudomallei K96243 New product name: type VI secretion system protein TssH-5. New gene name synonym: clpV-5. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-5 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-1 cluster later (PMID:21670170, PMID:22007185) and by the B. mallei literature (PMID:22892068, PMID:17555434). Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS1501 Burkholderia pseudomallei K96243 New gene name: tssG-5. New product name confidence: Class 2. New PubMed ID: 17660433. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1501 Burkholderia pseudomallei K96243 New product name: type VI secretion system protein TssG-5. New product name confidence: Class 1. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-5 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-1 cluster later (PMID:21670170, PMID:22007185) and by the B. mallei literature (PMID:22892068, PMID:17555434). Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS1500 Burkholderia pseudomallei K96243 New gene name: tssF-5. New product name confidence: Class 2. New PubMed ID: 17660433. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1500 Burkholderia pseudomallei K96243 New product name: type VI secretion system protein TssF-5. New product name confidence: Class 1. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-5 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-1 cluster later (PMID:21670170, PMID:22007185) and by the B. mallei literature (PMID:22892068, PMID:17555434). Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS1499 Burkholderia pseudomallei K96243 New gene name: tssE-5. New product name confidence: Class 2. New PubMed ID: 17660433. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1499 Burkholderia pseudomallei K96243 New product name: type VI secretion system protein TssE-5. New product name confidence: Class 1. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-5 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-1 cluster later (PMID:21670170, PMID:22007185) and by the B. mallei literature (PMID:22892068, PMID:17555434). Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS1498 Burkholderia pseudomallei K96243 New gene name: tssD-5. New product name confidence: Class 2. New PubMed ID: 17660433. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1498 Burkholderia pseudomallei K96243 New product name: type VI secretion system protein TssD-5. New gene name synonym: hcp1. New product name confidence: Class 1. New subcellular localization: Extracellular (Class 1). New subcellular localization evidence code (ECO): ECO:0000112. New subcellular localization PMID: 21300775. New PubMed ID: 17660433. New PubMed ID: 21300775. New PubMed ID: 24595140. New PubMed ID: 21670170. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-5 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-1 cluster later (PMID:21670170, PMID:22007185) and by the B. mallei literature (PMID:22892068, PMID:17555434). Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS1497 Burkholderia pseudomallei K96243 New gene name: tssC-5. New product name confidence: Class 2. New PubMed ID: 17660433. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1497 Burkholderia pseudomallei K96243 New product name: type VI secretion system protein TssC-5. New product name confidence: Class 1. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-5 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-1 cluster later (PMID:21670170, PMID:22007185) and by the B. mallei literature (PMID:22892068, PMID:17555434). Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS1496 Burkholderia pseudomallei K96243 New gene name: tssB-5. New product name confidence: Class 2. New PubMed ID: 17660433. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1496 Burkholderia pseudomallei K96243 New product name: type VI secretion system protein TssB-5. New product name confidence: Class 1. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-5 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-1 cluster later (PMID:21670170, PMID:22007185) and by the B. mallei literature (PMID:22892068, PMID:17555434). Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS1495 Burkholderia pseudomallei K96243 New gene name: regA. New product name confidence: Class 2. New PubMed ID: 17660433. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1495 Burkholderia pseudomallei K96243 New gene name: virA. New product name: two-component regulatory system, sensor kinase VirA. New product name confidence: Class 1. New PubMed ID: 17660433. New PubMed ID: 21300775. New PubMed ID: 22007185. New PubMed ID: 17555434. New PubMed ID: 21670170. New PubMed ID: 26094804. New PubMed ID: 26159714. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-5 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-1 cluster later (PMID:21670170, PMID:22007185) and by the B. mallei literature (PMID:22892068, PMID:17555434). Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS1494 Burkholderia pseudomallei K96243 New gene name: regB. New product name confidence: Class 2. New PubMed ID: 17660433. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1494 Burkholderia pseudomallei K96243 New gene name: virG. New product name: two-component regulatory system, response regulator VirG. New product name confidence: Class 1. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New PubMed ID: 21670170. New PubMed ID: 21300775. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-5 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-1 cluster later (PMID:21670170, PMID:22007185) and by the B. mallei literature (PMID:22892068, PMID:17555434). Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS1493 Burkholderia pseudomallei K96243 New gene name: tssA-5. New product name confidence: Class 2. New PubMed ID: 17660433. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1493 Burkholderia pseudomallei K96243 New product name: type VI secretion system protein TssA-5. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-5 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-1 cluster later (PMID:21670170, PMID:22007185) and by the B. mallei literature (PMID:22892068, PMID:17555434). Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS1492 Burkholderia pseudomallei K96243 New gene name: bimA. New product name: Burkholderia intracellular motility A, BimA. New product name confidence: Class 1. New PubMed ID: 15773977. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS1466 Burkholderia pseudomallei K96243 New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS1439 Burkholderia pseudomallei K96243 New gene name: bbfA. New product name: BbfA. New product name confidence: Class 1. New PubMed ID: 25830295. New PubMed ID: 24223950. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS1434 Burkholderia pseudomallei K96243 New gene name: bpaA. New product name: Burkholderia pseudomallei adhesion A, BpaA. New product name confidence: Class 1. New PubMed ID: 25830295. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1410 Burkholderia pseudomallei K96243 New gene name: bpsaB. New product name: type III secretion system chaperone protein BpsaB (T3SS-1). New product name confidence: Class 2. New PubMed ID: 20109238. New PubMed ID: 28664152. New PubMed ID: 21768285. New PubMed ID: 10403415. New PubMed ID: 11990489. New PubMed ID: 15621426. New comment: This gene is part of the type III secretion system T3SS-1 locus found in B. pseudomallei but not B. mallei or B. thailandensis. B. pseudomallei T3SS-1 and T3SS-2, but not T3SS-3 contribute to pathogenicity in Solanum lycopersicum (tomato) but not human monocytic cell line THP-1. (PMID:20109238). Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1409 Burkholderia pseudomallei K96243 New gene name: sctF. New product name: type III secretion system outer rod/major needle component SctF (T3SS-1). New product name confidence: Class 2. New PubMed ID: 20109238. New PubMed ID: 28664152. New PubMed ID: 21768285. New PubMed ID: 10403415. New PubMed ID: 11990489. New PubMed ID: 15621426. New comment: This gene is part of the type III secretion system T3SS-1 locus found in B. pseudomallei but not B. mallei or B. thailandensis. B. pseudomallei T3SS-1 and T3SS-2, but not T3SS-3 contribute to pathogenicity in Solanum lycopersicum (tomato) but not human monocytic cell line THP-1. (PMID:20109238). Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1408 Burkholderia pseudomallei K96243 New PubMed ID: 20109238. New PubMed ID: 28664152. New PubMed ID: 21768285. New PubMed ID: 10403415. New PubMed ID: 11990489. New PubMed ID: 15621426. New comment: This gene is part of the type III secretion system T3SS-1 locus found in B. pseudomallei but not B. mallei or B. thailandensis. B. pseudomallei T3SS-1 and T3SS-2, but not T3SS-3 contribute to pathogenicity in Solanum lycopersicum (tomato) but not human monocytic cell line THP-1. (PMID:20109238). Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1407 Burkholderia pseudomallei K96243 New gene name: bpscD. New product name: type III secretion system inner membrane ring component BpscD (T3SS-1). New product name confidence: Class 2. New PubMed ID: 20109238. New PubMed ID: 28664152. New PubMed ID: 21768285. New PubMed ID: 10403415. New PubMed ID: 11990489. New PubMed ID: 15621426. New comment: This gene is part of the type III secretion system T3SS-1 locus found in B. pseudomallei but not B. mallei or B. thailandensis. B. pseudomallei T3SS-1 and T3SS-2, but not T3SS-3 contribute to pathogenicity in Solanum lycopersicum (tomato) but not human monocytic cell line THP-1. (PMID:20109238). Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1406 Burkholderia pseudomallei K96243 New gene name: BpspV. New product name: type III secretion system secreted regulator BpspV (T3SS-1). New product name confidence: Class 2. New PubMed ID: 20109238. New PubMed ID: 28664152. New PubMed ID: 21768285. New PubMed ID: 10403415. New PubMed ID: 11990489. New PubMed ID: 15621426. New comment: This gene is part of the type III secretion system T3SS-1 locus found in B. pseudomallei but not B. mallei or B. thailandensis. B. pseudomallei T3SS-1 and T3SS-2, but not T3SS-3 contribute to pathogenicity in Solanum lycopersicum (tomato) but not human monocytic cell line THP-1. (PMID:20109238). Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1405 Burkholderia pseudomallei K96243 New gene name: BpscS. New product name: type III secretion system inner membrane export apparatus protein BpscS (T3SS-1). New product name confidence: Class 2. New PubMed ID: 20109238. New PubMed ID: 28664152. New PubMed ID: 21768285. New PubMed ID: 10403415. New PubMed ID: 11990489. New PubMed ID: 15621426. New comment: This gene is part of the type III secretion system T3SS-1 locus found in B. pseudomallei but not B. mallei or B. thailandensis. B. pseudomallei T3SS-1 and T3SS-2, but not T3SS-3 contribute to pathogenicity in Solanum lycopersicum (tomato) but not human monocytic cell line THP-1. (PMID:20109238). Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1404 Burkholderia pseudomallei K96243 New gene name: bpscR. New product name: type III secretion system inner membrane export apparatus protein BpscR (T3SS-1). New product name confidence: Class 2. New PubMed ID: 20109238. New PubMed ID: 28664152. New PubMed ID: 21768285. New PubMed ID: 10403415. New PubMed ID: 11990489. New PubMed ID: 15621426. New comment: This gene is part of the type III secretion system T3SS-1 locus found in B. pseudomallei but not B. mallei or B. thailandensis. B. pseudomallei T3SS-1 and T3SS-2, but not T3SS-3 contribute to pathogenicity in Solanum lycopersicum (tomato) but not human monocytic cell line THP-1. (PMID:20109238). Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1403 Burkholderia pseudomallei K96243 New gene name: bpscQ. New product name: type III secretion system cytoplasmic ring protein BpscQ (T3SS-1). New product name confidence: Class 2. New PubMed ID: 20109238. New PubMed ID: 28664152. New PubMed ID: 21768285. New PubMed ID: 10403415. New PubMed ID: 11990489. New PubMed ID: 15621426. New comment: This gene is part of the type III secretion system T3SS-1 locus found in B. pseudomallei but not B. mallei or B. thailandensis. B. pseudomallei T3SS-1 and T3SS-2, but not T3SS-3 contribute to pathogenicity in Solanum lycopersicum (tomato) but not human monocytic cell line THP-1. (PMID:20109238). Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1402 Burkholderia pseudomallei K96243 New gene name: bpsaP. New product name: type III secretion system needle length protein BpsaP (T3SS-1). New product name confidence: Class 2. New PubMed ID: 20109238. New PubMed ID: 28664152. New PubMed ID: 21768285. New PubMed ID: 10403415. New PubMed ID: 11990489. New PubMed ID: 15621426. New comment: This gene is part of the type III secretion system T3SS-1 locus found in B. pseudomallei but not B. mallei or B. thailandensis. B. pseudomallei T3SS-1 and T3SS-2, but not T3SS-3 contribute to pathogenicity in Solanum lycopersicum (tomato) but not human monocytic cell line THP-1. (PMID:20109238). Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1401 Burkholderia pseudomallei K96243 New gene name: bpscV. New product name: type III secretion system export apparatus protein BpscV (T3SS-1). New product name confidence: Class 2. New PubMed ID: 20109238. New PubMed ID: 28664152. New PubMed ID: 21768285. New PubMed ID: 10403415. New PubMed ID: 11990489. New PubMed ID: 15621426. New comment: This gene is part of the type III secretion system T3SS-1 locus found in B. pseudomallei but not B. mallei or B. thailandensis. B. pseudomallei T3SS-1 and T3SS-2, but not T3SS-3 contribute to pathogenicity in Solanum lycopersicum (tomato) but not human monocytic cell line THP-1. (PMID:20109238). Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1400 Burkholderia pseudomallei K96243 New gene name: bpscU. New product name: autoprotease, early/middle substrate switch BpscU (T3SS-1). New product name confidence: Class 2. New PubMed ID: 20109238. New PubMed ID: 28664152. New PubMed ID: 21768285. New PubMed ID: 10403415. New PubMed ID: 11990489. New PubMed ID: 15621426. New comment: This gene is part of the type III secretion system T3SS-1 locus found in B. pseudomallei but not B. mallei or B. thailandensis. B. pseudomallei T3SS-1 and T3SS-2, but not T3SS-3 contribute to pathogenicity in Solanum lycopersicum (tomato) but not human monocytic cell line THP-1. (PMID:20109238). Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1399 Burkholderia pseudomallei K96243 New gene name: BpspK. New product name: type III secretion system inner rod component BpspK (T3SS-1). New product name confidence: Class 2. New PubMed ID: 20109238. New PubMed ID: 28664152. New PubMed ID: 21768285. New PubMed ID: 10403415. New PubMed ID: 11990489. New PubMed ID: 15621426. New comment: This gene is part of the type III secretion system T3SS-1 locus found in B. pseudomallei but not B. mallei or B. thailandensis. B. pseudomallei T3SS-1 and T3SS-2, but not T3SS-3 contribute to pathogenicity in Solanum lycopersicum (tomato) but not human monocytic cell line THP-1. (PMID:20109238). Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1398 Burkholderia pseudomallei K96243 New gene name: bpspJ. New product name: type III secretion system inner rod component BpspJ (T3SS-1). New product name confidence: Class 2. New PubMed ID: 20109238. New PubMed ID: 28664152. New PubMed ID: 21768285. New PubMed ID: 10403415. New PubMed ID: 11990489. New PubMed ID: 15621426. New comment: This gene is part of the type III secretion system T3SS-1 locus found in B. pseudomallei but not B. mallei or B. thailandensis. B. pseudomallei T3SS-1 and T3SS-2, but not T3SS-3 contribute to pathogenicity in Solanum lycopersicum (tomato) but not human monocytic cell line THP-1. (PMID:20109238). Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1397 Burkholderia pseudomallei K96243 New gene name: bpscJ. New product name: type III secretion system inner membrane ring component BpscJ (T3SS-1). New product name confidence: Class 2. New PubMed ID: 20109238. New PubMed ID: 28664152. New PubMed ID: 21768285. New PubMed ID: 10403415. New PubMed ID: 11990489. New PubMed ID: 15621426. New comment: This gene is part of the type III secretion system T3SS-1 locus found in B. pseudomallei but not B. mallei or B. thailandensis. B. pseudomallei T3SS-1 and T3SS-2, but not T3SS-3 contribute to pathogenicity in Solanum lycopersicum (tomato) but not human monocytic cell line THP-1. (PMID:20109238). Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1396 Burkholderia pseudomallei K96243 New gene name: bpspH. New product name: type III secretion system inner membrane component BpspH (T3SS-1). New gene name synonym: sctK. New product name confidence: Class 2. New PubMed ID: 20109238. New PubMed ID: 28664152. New PubMed ID: 21768285. New PubMed ID: 10403415. New PubMed ID: 11990489. New PubMed ID: 15621426. New comment: This gene is part of the type III secretion system T3SS-1 locus found in B. pseudomallei but not B. mallei or B. thailandensis. B. pseudomallei T3SS-1 and T3SS-2, but not T3SS-3 contribute to pathogenicity in Solanum lycopersicum (tomato) but not human monocytic cell line THP-1. (PMID:20109238). Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1395 Burkholderia pseudomallei K96243 New gene name: bpscL. New product name: type III secretion system stator protein BpscL (T3SS-1). New product name confidence: Class 2. New PubMed ID: 20109238. New PubMed ID: 28664152. New PubMed ID: 21768285. New PubMed ID: 10403415. New PubMed ID: 11990489. New PubMed ID: 15621426. New comment: This gene is part of the type III secretion system T3SS-1 locus found in B. pseudomallei but not B. mallei or B. thailandensis. B. pseudomallei T3SS-1 and T3SS-2, but not T3SS-3 contribute to pathogenicity in Solanum lycopersicum (tomato) but not human monocytic cell line THP-1. (PMID:20109238). Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1394 Burkholderia pseudomallei K96243 New gene name: bpscN. New product name: type III secretion system ATPase BpscN (T3SS-1). New product name confidence: Class 1. New PubMed ID: 20109238. New PubMed ID: 28664152. New PubMed ID: 21768285. New PubMed ID: 10403415. New PubMed ID: 11990489. New PubMed ID: 15621426. New comment: This gene is part of the type III secretion system T3SS-1 locus found in B. pseudomallei but not B. mallei or B. thailandensis. B. pseudomallei T3SS-1 and T3SS-2, but not T3SS-3 contribute to pathogenicity in Solanum lycopersicum (tomato) but not human monocytic cell line THP-1. (PMID:20109238). Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1393 Burkholderia pseudomallei K96243 New gene name: bpspD. New product name: type III secretion system stalk protein BpspD (T3SS-1). New gene name synonym: sctO. New product name confidence: Class 2. New PubMed ID: 20109238. New PubMed ID: 28664152. New PubMed ID: 21768285. New PubMed ID: 10403415. New PubMed ID: 11990489. New PubMed ID: 15621426. New comment: This gene is part of the type III secretion system T3SS-1 locus found in B. pseudomallei but not B. mallei or B. thailandensis. B. pseudomallei T3SS-1 and T3SS-2, but not T3SS-3 contribute to pathogenicity in Solanum lycopersicum (tomato) but not human monocytic cell line THP-1. (PMID:20109238). Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1392 Burkholderia pseudomallei K96243 New gene name: bpscT. New product name: type III secretion system inner membrane export apparatus protein BpscT (T3SS-1). New product name confidence: Class 2. New PubMed ID: 20109238. New PubMed ID: 28664152. New PubMed ID: 21768285. New PubMed ID: 10403415. New PubMed ID: 11990489. New PubMed ID: 15621426. New comment: This gene is part of the type III secretion system T3SS-1 locus found in B. pseudomallei but not B. mallei or B. thailandensis. B. pseudomallei T3SS-1 and T3SS-2, but not T3SS-3 contribute to pathogenicity in Solanum lycopersicum (tomato) but not human monocytic cell line THP-1. (PMID:20109238). Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1391 Burkholderia pseudomallei K96243 New gene name: bpspB. New product name: type III secretion system regulator BpscB (T3SS-1). New product name confidence: Class 2. New PubMed ID: 20109238. New PubMed ID: 28664152. New PubMed ID: 21768285. New PubMed ID: 10403415. New PubMed ID: 11990489. New PubMed ID: 15621426. New comment: This gene is part of the type III secretion system T3SS-1 locus found in B. pseudomallei but not B. mallei or B. thailandensis. B. pseudomallei T3SS-1 and T3SS-2, but not T3SS-3 contribute to pathogenicity in Solanum lycopersicum (tomato) but not human monocytic cell line THP-1. (PMID:20109238). Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1390 Burkholderia pseudomallei K96243 New gene name: bpscC. New product name: type III secretion system outer membrane ring protein / secretin BpscC (T3SS-1). New product name confidence: Class 2. New PubMed ID: 20109238. New PubMed ID: 28664152. New PubMed ID: 21768285. New PubMed ID: 10403415. New PubMed ID: 11990489. New PubMed ID: 15621426. New comment: This gene is part of the type III secretion system T3SS-1 locus found in B. pseudomallei but not B. mallei or B. thailandensis. B. pseudomallei T3SS-1 and T3SS-2, but not T3SS-3 contribute to pathogenicity in Solanum lycopersicum (tomato) but not human monocytic cell line THP-1. (PMID:20109238). Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1385 Burkholderia pseudomallei K96243 New gene name: chbP. New product name: Cif homolog in Burkholderia pseudomallei (CHBP). New gene name synonym: cif. New product name synonym: cell cycle inhibiting factor Cif. New product name confidence: Class 1. New subcellular localization: Host Associated (Class 1). New subcellular localization evidence code (ECO): ECO:0005600. New subcellular localization PMID: 24809950. New PubMed ID: 24809950. New PubMed ID: 19225106. New PubMed ID: 20688984. New PubMed ID: 28166272. New comment: CHBP contains a conserved catalytic triad (C156, H211, and Q231) that is important for cell cycle inhibition by deamindating Gln40 in ubiquitin (PMID: 20688984). Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS1356 Burkholderia pseudomallei K96243 New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1356 Burkholderia pseudomallei K96243 New product name: regulatory protein. New product name confidence: Class 1. New PubMed ID: 24927285. New PubMed ID: 22354666. New comment: Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS1260 Burkholderia pseudomallei K96243 New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS1249 Burkholderia pseudomallei K96243 New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 30, 2018 BPSS1228 Burkholderia pseudomallei K96243 New PubMed ID: 28003338. New comment: Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS1209 Burkholderia pseudomallei K96243 New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS1206 Burkholderia pseudomallei K96243 New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS1170 Burkholderia pseudomallei K96243 New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS1143 Burkholderia pseudomallei K96243 New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS1103 Burkholderia pseudomallei K96243 New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS1101 Burkholderia pseudomallei K96243 New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS1097 Burkholderia pseudomallei K96243 New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS1080 Burkholderia pseudomallei K96243 New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS1078 Burkholderia pseudomallei K96243 New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS1068 Burkholderia pseudomallei K96243 New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS1065 Burkholderia pseudomallei K96243 New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS0974 Burkholderia pseudomallei K96243 New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS0963 Burkholderia pseudomallei K96243 New gene name: bcaB. New product name: BcaB. New product name confidence: Class 1. New PubMed ID: 25830295. New PubMed ID: 23340315. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS0962 Burkholderia pseudomallei K96243 New gene name: bcaA. New product name: Burkholderia classical autotransporter A, BcaA. New product name confidence: Class 1. New PubMed ID: 25830295. New PubMed ID: 23340315. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS0913 Burkholderia pseudomallei K96243 New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS0908 Burkholderia pseudomallei K96243 New gene name: bpaE. New product name: BpaE. New product name confidence: Class 1. New PubMed ID: 23716608. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS0897 Burkholderia pseudomallei K96243 New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS0879 Burkholderia pseudomallei K96243 New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS0839 Burkholderia pseudomallei K96243 New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS0827 Burkholderia pseudomallei K96243 New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS0802 Burkholderia pseudomallei K96243 New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS0796 Burkholderia pseudomallei K96243 New gene name: boaA. New product name: Burkholderia oligomeric coiled-coil adhesin A, BoaA. New product name confidence: Class 1. New PubMed ID: 20920184. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
Apr 10, 2015 BPSS0772 Burkholderia pseudomallei K96243 New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0001119 .New subcellular localization PMID: 25635268 .New PubMed ID: 25635268. Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
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