Strain |
Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest |
Locus Tag |
BPSS1356
|
Name |
|
Replicon | chromosome 2 |
Genomic location | 1853417 - 1856794 (+ strand) |
RefSeq | YP_111366.1 |
GI | 53722381 |
Entrez | 3096459 |
GI | 53722381 |
INSDC | CAH38827.1 |
NCBI Locus Tag | BPSS1356 |
RefSeq | YP_111366.1,GeneID |
UniParc | UPI000043BC7C |
UniProtKB Acc | Q63KK6 |
UniProtKB ID | Q63KK6_BURPS |
UniRef100 | UniRef100_A0A069B9X4 |
UniRef50 | UniRef50_A1UVS7 |
UniRef90 | UniRef90_A1UVS7 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
regulatory protein
|
Synonyms |
hypothetical protein |
Evidence for Translation |
Detected in B. pseudomallei strain DD503 using trypsin shaving and mass spectrometry (PMID:21391724).
|
Charge (pH 7) | -15.06 |
Kyte-Doolittle Hydrophobicity Value | -0.203 |
Molecular Weight (kDa) | 124133.0 |
Isoelectric Point (pI) | 6.22 |
Individual Mappings | |
Additional evidence for subcellular localization |
Detected in Triton-insoluble fraction of lysozyme-treated B. pseudomallei DD503 cells using trypsin shaving and mass spectrometry (PMID:21391724).
|
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
5IKY | HYDROLASE,LYASE | 03/04/16 | Apo structure of Obc1, a bifunctional enzyme for quorum sensing-dependent oxalogenesis | BURKHOLDERIA THAILANDENSIS (STRAIN E264 / ATCC 700388 / DSM 13276 / CIP 106301) | 2.5 | X-RAY DIFFRACTION | 95.0 |
5IKZ | HYDROLASE,LYASE | 03/04/16 | Glycerol bound structure of Obc1, a bifunctional enzyme for quorum sensing-dependent oxalogenesis | BURKHOLDERIA THAILANDENSIS (STRAIN E264 / ATCC 700388 / DSM 13276 / CIP 106301) | 2.8 | X-RAY DIFFRACTION | 95.0 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 23 genera
|
Burkholderia Ortholog Group |
BG019464 (440 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: BPSS1356
Search term: regulatory protein
|
Quantitative proteomic analysis of Burkholderia pseudomallei Bsa type III secretion system effectors using hypersecreting mutants.
Vander Broek CW, Chalmers KJ, Stevens MP, Stevens JM
Mol Cell Proteomics 2015 Apr;14(4):905-16
PubMed ID: 25635268
|
The multiple roles of hypothetical gene BPSS1356 in Burkholderia pseudomallei.
Yam H, Rahim AA, Mohamad S, Mahadi NM, Manaf UA, Shu-Chien AC, Najimudin N
PLoS One 2014;9(6):e99218
PubMed ID: 24927285
|
Validation of a Burkholderia pseudomallei hypothetical protein and determination of its translational start codon using chromosomal integration of His-Tag coding sequence.
Yam H, Abdul Rahim A, Gim Luan O, Samian R, Abdul Manaf U, Mohamad S, Najimudin N
Protein J 2012 Mar;31(3):246-9
PubMed ID: 22354666
|