Burkholderia pseudomallei K96243, BPSL0453

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Cellular Component	GO:0016020	membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00116	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0009055	electron transfer activity	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF46626	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0016021	integral component of membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:PS50999	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0009279	cell outer membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:PR01021	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0005507	copper ion binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00116	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0020037	heme binding	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF46626	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0004129	cytochrome-c oxidase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00116	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0016491	oxidoreductase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR02866	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0022900	electron transport chain	ISM Inferred from Sequence Model Term mapped from: InterPro:PS50999	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	bps01100	Metabolic pathways	73.0+/03-31, Mar 15	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	bps00190	Oxidative phosphorylation	73.0+/03-31, Mar 15	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF02790	Cytochrome C oxidase subunit II, transmembrane domain	IPR011759	Cytochrome C oxidase subunit II, transmembrane domain	44	124	9.1E-17
PRINTS	PR01166	Cytochrome c oxidase subunit II signature			247	264	1.3E-35
MobiDBLite	mobidb-lite	consensus disorder prediction			375	408	-
Pfam	PF00116	Cytochrome C oxidase subunit II, periplasmic domain	IPR002429	Cytochrome c oxidase subunit II-like C-terminal	139	264	4.4E-33
ProSiteProfiles	PS51123	OmpA-like domain profile.	IPR006665	OmpA-like domain	416	525	27.135
PRINTS	PR01021	OMPA domain signature	IPR006664	Outer membrane protein, bacterial	429	451	3.9E-7
Gene3D	G3DSA:1.10.760.10		IPR036909	Cytochrome c-like domain superfamily	279	400	9.2E-26
CDD	cd07185	OmpA_C-like	IPR006665	OmpA-like domain	427	521	6.19189E-20
SUPERFAMILY	SSF103088		IPR036737	OmpA-like domain superfamily	422	521	6.67E-20
PRINTS	PR01166	Cytochrome c oxidase subunit II signature			209	229	1.3E-35
PRINTS	PR01166	Cytochrome c oxidase subunit II signature			185	206	1.3E-35
SUPERFAMILY	SSF46626		IPR036909	Cytochrome c-like domain superfamily	276	380	8.73E-22
SUPERFAMILY	SSF81464		IPR036257	Cytochrome C oxidase subunit II, transmembrane domain superfamily	40	133	5.23E-28
Pfam	PF00691	OmpA family	IPR006665	OmpA-like domain	428	501	3.0E-15
SUPERFAMILY	SSF49503		IPR008972	Cupredoxin	131	321	2.13E-48
TIGRFAM	TIGR02866	CoxB: cytochrome c oxidase, subunit II	IPR014222	Cytochrome c oxidase, subunit II	52	274	5.4E-57
ProSiteProfiles	PS51007	Cytochrome c family profile.	IPR009056	Cytochrome c-like domain	296	372	9.363
Gene3D	G3DSA:2.60.40.420		IPR008972	Cupredoxin	135	274	9.6E-78
ProSiteProfiles	PS50857	Cytochrome oxidase subunit II copper A binding domain profile.	IPR002429	Cytochrome c oxidase subunit II-like C-terminal	136	276	36.863
PRINTS	PR01166	Cytochrome c oxidase subunit II signature			113	133	1.3E-35
PRINTS	PR01166	Cytochrome c oxidase subunit II signature			101	113	1.3E-35
ProSiteProfiles	PS50999	Cytochrome oxidase subunit II transmembrane region profile.	IPR011759	Cytochrome C oxidase subunit II, transmembrane domain	40	135	17.524
PRINTS	PR01021	OMPA domain signature	IPR006664	Outer membrane protein, bacterial	459	474	3.9E-7
Pfam	PF13442	Cytochrome C oxidase, cbb3-type, subunit III	IPR009056	Cytochrome c-like domain	297	367	5.4E-11
Gene3D	G3DSA:3.30.1330.60		IPR036737	OmpA-like domain superfamily	401	521	2.4E-20
PRINTS	PR01166	Cytochrome c oxidase subunit II signature			135	154	1.3E-35
ProSitePatterns	PS00078	CO II and nitrous oxide reductase dinuclear copper centers signature.	IPR001505	Copper centre Cu(A)	210	258	-
Gene3D	G3DSA:1.10.287.90		IPR036257	Cytochrome C oxidase subunit II, transmembrane domain superfamily	63	134	9.6E-78
PRINTS	PR01021	OMPA domain signature	IPR006664	Outer membrane protein, bacterial	474	490	3.9E-7

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.