Burkholderia cenocepacia AU 1054, BCEN_RS12440
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: GAAGCCGGCC-N8-GGCCGGCTTC | 2745698 | 2745725 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GAAGCCGGCC-N8-GGCCGGCTTC | 2745698 | 2745725 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CCGGCGTCCGC-N89-GCGGACGCCGG | 2745896 | 2746006 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CCGGCGTCCGC-N89-GCGGACGCCGG | 2745896 | 2746006 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: GCGCTTCGCG-N68-CGCGAAGCGC | 2746255 | 2746342 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GCGCTTCGCG-N68-CGCGAAGCGC | 2746255 | 2746342 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GGTCGGGCTG-N9-CAGCCCGACC | 2746486 | 2746514 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GGTCGGGCTG-N9-CAGCCCGACC | 2746486 | 2746514 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Rho-independent transcription terminator TERM 847 | 2747209 | 2747224 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Rho-independent transcription terminator TERM 848 | 2747209 | 2747224 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Inverted repeat: AAAACGGCGCC-N2-GGCGCCGTTTT | 2747205 | 2747228 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: AAAACGGCGCC-N2-GGCGCCGTTTT | 2747205 | 2747228 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |