Motif View

Internal ID 1761129
Source Database TransTermHP TERM 848
Feature Type terminator
Name
Rho-independent transcription terminator TERM 848
Sequence CGGCGCCGGGGCGCCG
Look for more occurrences
Start 2747209
End 2747224
Strand -
Genomic Context
Replicon Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGCGGCACACGAAAA(5' tail) CGGCGC(5' stem) CCCG(loop) GCGCCG(3' stem) TTTTTCATTGGATGC(3' tail). Confidence: 95. opp_overlap 2747209

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685