Burkholderia cenocepacia AU 1054, BCEN_RS12075
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: CGGCGATCTTC-N3-GAAGATCGCCG | 2671510 | 2671534 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CGGCGATCTTC-N3-GAAGATCGCCG | 2671510 | 2671534 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GCGTCGCCGA-N61-TCGGCGACGC | 2671535 | 2671615 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GCGTCGCCGA-N61-TCGGCGACGC | 2671535 | 2671615 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: GCGACGCCGA-N58-TCGGCGTCGC | 2670358 | 2670435 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GCGACGCCGA-N58-TCGGCGTCGC | 2670358 | 2670435 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CGAGCCGCTG-N3-CAGCGGCTCG | 2670757 | 2670779 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CGAGCCGCTG-N3-CAGCGGCTCG | 2670757 | 2670779 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Rho-independent transcription terminator TERM 818 | 2669687 | 2669701 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Inverted repeat: GCCGGCACGTG-N3-CACGTGCCGGC | 2669926 | 2669950 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GCCGGCACGTG-N3-CACGTGCCGGC | 2669926 | 2669950 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: TATCTATTCTT-N24-AAGAATAGATA | 2669992 | 2670037 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: TATCTATTCTT-N24-AAGAATAGATA | 2669992 | 2670037 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |