Burkholderia cenocepacia J2315, BCAM2056 (bcscS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia cenocepacia J2315
GCF_000009485.1|latest
Locus Tag
BCAM2056
NCBI Locus TagQU43_RS64640
Name
bcscS
Replicon chromosome 2
Genomic location 2287737 - 2288015 (- strand)

Cross-References

RefSeq WP_006480854.1
GI 206563897
Entrez 6930382
GI 206563897
INSDC CAR55915.1
NCBI Locus Tag QU43_RS64640
NCBI Old Locus Tag BCAM2056
RefSeq WP_006480854.1,GeneID
UniParc UPI0000005455
UniProtKB Acc B4EN99
UniProtKB ID B4EN99_BURCJ
UniRef100 UniRef100_Q8VP22
UniRef50 UniRef50_B3RAD7
UniRef90 UniRef90_Q8VP22

Product

Feature Type CDS
Coding Frame 1
Product Name
type III secretion system protein
Synonyms
Evidence for Translation
Charge (pH 7) -0.02
Kyte-Doolittle Hydrophobicity Value 1.333
Molecular Weight (kDa) 9729.7
Isoelectric Point (pI) 6.62

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 215 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG003803 (580 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BCAM2056
Search term: bcscS

References

A putative type III secretion gene cluster is widely distributed in the Burkholderia cepacia complex but absent from genomovar I.
Parsons YN, Glendinning KJ, Thornton V, Hales BA, Hart CA, Winstanley C
FEMS Microbiol Lett 2001 Sep 11;203(1):103-8
PubMed ID: 11557147
Sequence divergence in type III secretion gene clusters of the Burkholderia cepacia complex.
Glendinning KJ, Parsons YN, Duangsonk K, Hales BA, Humphreys D, Hart CA, Winstanley C
FEMS Microbiol Lett 2004 Jun 15;235(2):229-35
PubMed ID: 15183868