Burkholderia cenocepacia J2315, BCAM2056 (bcscS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0030254 protein secretion by the type III secretion system
IGC
Inferred from Genomic Context
ECO:0000177
genomic context evidence
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF004669
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF004669
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009306 protein secretion
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF004669
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009306 protein secretion
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF004669
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016021 integral component of membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01403
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016021 integral component of membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01403
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj03070 Bacterial secretion system 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00952 Type III secretion system inner membrane Q protein family signature IPR002191 Bacterial export protein family 3 54 76 3.6E-20
TIGRFAM TIGR01403 fliQ_rel_III: type III secretion protein, HrpO family IPR006306 Type III secretion protein HrpO 6 84 1.6E-25
PRINTS PR00952 Type III secretion system inner membrane Q protein family signature IPR002191 Bacterial export protein family 3 39 54 3.6E-20
PIRSF PIRSF004669 IPR002191 Bacterial export protein family 3 1 88 5.8E-24
Pfam PF01313 Bacterial export proteins, family 3 IPR002191 Bacterial export protein family 3 6 77 2.7E-21
PRINTS PR00952 Type III secretion system inner membrane Q protein family signature IPR002191 Bacterial export protein family 3 18 39 3.6E-20

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.