Strain |
Burkholderia cenocepacia MC0-3
GCF_000019505.1|latest |
Locus Tag |
Bcenmc03_3710
|
NCBI Locus Tag | BCENMC03_RS18765 |
Name |
ecfL
|
Replicon | chromosome 2 |
Genomic location | 617399 - 618667 (- strand) |
RefSeq | WP_011548203.1 |
GI | 170736092 |
Entrez | 6126544 |
GI | 170736092 |
INSDC | ACA92862.1 |
NCBI Locus Tag | BCENMC03_RS18765 |
NCBI Old Locus Tag | Bcenmc03_3710 |
RefSeq | WP_011548203.1 |
UniParc | UPI00006DA4AF |
UniProtKB Acc | B1K4E4 |
UniProtKB ID | B1K4E4_BURCC |
UniRef100 | UniRef100_A0AYS5 |
UniRef50 | UniRef50_C5CSL3 |
UniRef90 | UniRef90_A4JLM3 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
RNA polymerase ECF-subfamily sigma factor
|
Synonyms |
sigma factor 70 EcfL |
Evidence for Translation | |
Charge (pH 7) | -7.18 |
Kyte-Doolittle Hydrophobicity Value | 0.010 |
Molecular Weight (kDa) | 45911.1 |
Isoelectric Point (pI) | 5.96 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 146 genera
|
Burkholderia Ortholog Group |
BG004844 (654 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: Bcenmc03_3710
Search term: ecfL
Search term: RNA polymerase ECF-subfamily sigma factor
|
Architecture of Burkholderia cepacia complex sigma70 gene family: evidence of alternative primary and clade-specific factors, and genomic instability.
Menard A, de Los Santos PE, Graindorge A, Cournoyer B
BMC Genomics 2007 Sep 4;8:308
PubMed ID: 17784948
|