Burkholderia ambifaria AMMD, BAMB_RS16960 (bceR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia ambifaria AMMD - Assembly GCF_000203915.1
GCF_000203915.1|latest
Locus Tag
BAMB_RS16960
NCBI Old Locus TagBamb_3364
Name
bceR
Replicon chromosome 2
Genomic location 159479 - 161947 (+ strand)
CommentDisruption of the bceQ and bceR genes, in B. cepacia IST408 (PMID:19948863) resulted in the abolishment of cepacian biosynthesis.
CommentNote that another gene (BCAM1493) for a two-component response regulator in B. cenocepacia J2315 was also assigned the name bceR at a later date (PMID:25519693).
CommentMember of the bce-II gene cluster

Cross-References

RefSeq WP_011658397.1
GI 499977679
NCBI Locus Tag BAMB_RS16960
NCBI Old Locus Tag Bamb_3364
RefSeq WP_011658397.1

Product

Feature Type CDS
Coding Frame NA
Product Name
glycosyl transferase family 1
Product Name Confidence: Class 2
Synonyms
Evidence for Translation
Charge (pH 7) 11.84
Kyte-Doolittle Hydrophobicity Value -0.026
Molecular Weight (kDa) 89683.9
Isoelectric Point (pI) 8.70

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG003106 (652 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BAMB_RS16960
Search term: bceR

References

Distribution of cepacian biosynthesis genes among environmental and clinical Burkholderia strains and role of cepacian exopolysaccharide in resistance to stress conditions.
Ferreira AS(1), Leitão JH, Silva IN, Pinheiro PF, Sousa SA, Ramos CG, Moreira LM.
Appl Environ Microbiol. 2010 Jan;76(2):441-50.
PubMed ID: 19948863