Burkholderia ambifaria AMMD, BAMB_RS16930 (bceM)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Burkholderia ambifaria AMMD - Assembly GCF_000203915.1
GCF_000203915.1|latest |
| Locus Tag |
BAMB_RS16930
|
| NCBI Old Locus Tag | Bamb_3357 |
| Name |
bceM
|
| Replicon | chromosome 2 |
| Genomic location | 151001 - 151969 (- strand) |
| Comment | Member of the bce-II gene cluster |
Cross-References
| RefSeq | WP_011658391.1 |
| GI | 499977673 |
| NCBI Locus Tag | BAMB_RS16930 |
| NCBI Old Locus Tag | Bamb_3357 |
| RefSeq | WP_011658391.1 |
Product
| Feature Type | CDS |
| Coding Frame | NA |
| Product Name |
GDP-6-deoxy-D-lyxo-4-hexulose reductase BceM
|
| Synonyms |
GDP-6-deoxy-D-lyxo-4-hexulose reductase |
| Evidence for Translation | |
| Charge (pH 7) | -0.86 |
| Kyte-Doolittle Hydrophobicity Value | -0.094 |
| Molecular Weight (kDa) | 34616.9 |
| Isoelectric Point (pI) | 6.68 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 4LW8 | ISOMERASE | 07/26/13 | Crystal structure of a putative epimerase from Burkholderia cenocepacia J2315 | BURKHOLDERIA CENOCEPACIA | 2.1 | X-RAY DIFFRACTION | 91.7 |
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Burkholderia Ortholog Group |
BG000738 (646 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: BAMB_RS16930
Search term: bceM
Search term: GDP-6-deoxy-D-lyxo-4-hexulose reductase BceM
|
Human Homologs
References
|
Distribution of cepacian biosynthesis genes among environmental and clinical Burkholderia strains and role of cepacian exopolysaccharide in resistance to stress conditions.
Ferreira AS, Leitão JH, Silva IN, Pinheiro PF, Sousa SA, Ramos CG, Moreira LM
Appl Environ Microbiol 2010 Jan;76(2):441-50
PubMed ID: 19948863
|