Burkholderia cenocepacia AU 1054, BCEN_RS31150 (rimO)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Burkholderia cenocepacia AU 1054
GCF_000014085.1|latest |
| Locus Tag |
BCEN_RS31150
|
| NCBI Old Locus Tag | Bcen_6297 |
| Name |
rimO
|
| Replicon | chromosome 3 |
| Genomic location | 910369 - 911730 (+ strand) |
Cross-References
| RefSeq | WP_011549710.1 |
| GI | 499868976 |
| NCBI Locus Tag | BCEN_RS31150 |
| NCBI Old Locus Tag | Bcen_6297 |
| RefSeq | WP_011549710.1 |
Product
| Feature Type | CDS |
| Coding Frame | NA |
| Product Name |
ribosomal protein S12 methylthiotransferase RimO
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -14.33 |
| Kyte-Doolittle Hydrophobicity Value | -0.104 |
| Molecular Weight (kDa) | 49423.0 |
| Isoelectric Point (pI) | 5.07 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Burkholderia Ortholog Group |
BG001621 (653 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: BCEN_RS31150
Search term: rimO
Search term: ribosomal protein S12 methylthiotransferase RimO
|
Human Homologs
|
Ensembl
97, assembly
GRCh38.p12
|
CDK5 regulatory subunit associated protein 1 [Source:HGNC Symbol;Acc:HGNC:15880]
E-value:
7.6e-32
Percent Identity:
25.7
|
|
Ensembl
97, assembly
GRCh38.p12
|
CDK5 regulatory subunit associated protein 1 [Source:HGNC Symbol;Acc:HGNC:15880]
E-value:
7.6e-32
Percent Identity:
25.7
|
References
No references are associated with this feature.