Burkholderia cenocepacia J2315, BCAL3014 (rph)

Gene Feature Overview

Strain	Burkholderia cenocepacia J2315 GCF_000009485.1|latest
Locus Tag	BCAL3014
NCBI Locus Tag	QU43_RS51765
Name	rph
Replicon	chromosome 1
Genomic location	3305431 - 3306171 (+ strand)

Cross-References

RefSeq	WP_006486647.1
GI	206561359
Entrez	6932945
GI	206561359
INSDC	CAR53336.1
NCBI Locus Tag	QU43_RS51765
NCBI Old Locus Tag	BCAL3014
RefSeq	WP_006486647.1,GeneID
UniParc	UPI00017B9830
UniProtKB Acc	B4EBP8
UniProtKB ID	RNPH_BURCJ
UniRef100	UniRef100_B4EBP8
UniRef50	UniRef50_O67069
UniRef90	UniRef90_A4JCC2

Product

Feature Type	CDS
Coding Frame	1
Product Name	ribonuclease PH
Synonyms
Evidence for Translation
Charge (pH 7)	-3.41
Kyte-Doolittle Hydrophobicity Value	-0.142
Molecular Weight (kDa)	26256.4
Isoelectric Point (pI)	6.16

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 470 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG000830 (654 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BCAL3014 Search term: rph Search term: ribonuclease PH

Human Homologs

References