Burkholderia cenocepacia J2315, BCAL3014 (rph)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0008033 tRNA processing
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00564
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000049 tRNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00564
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0009022 tRNA nucleotidyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00564
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd11362 RNase_PH_bact IPR002381 Ribonuclease PH, bacterial-type 15 241 2.61008E-146
Pfam PF01138 3' exoribonuclease family, domain 1 IPR001247 Exoribonuclease, phosphorolytic domain 1 15 145 5.7E-22
TIGRFAM TIGR01966 RNasePH: ribonuclease PH IPR002381 Ribonuclease PH, bacterial-type 7 241 4.4E-118
Gene3D G3DSA:3.30.230.70 IPR027408 PNPase/RNase PH domain superfamily 14 242 7.3E-61
SUPERFAMILY SSF54211 IPR020568 Ribosomal protein S5 domain 2-type fold 7 186 7.59E-44
Hamap MF_00564 Ribonuclease PH [rph]. IPR002381 Ribonuclease PH, bacterial-type 16 242 44.846
Pfam PF03725 3' exoribonuclease family, domain 2 IPR015847 Exoribonuclease, phosphorolytic domain 2 164 227 1.5E-8
SUPERFAMILY SSF55666 IPR036345 Exoribonuclease, PH domain 2 superfamily 158 241 1.07E-25
ProSitePatterns PS01277 Ribonuclease PH signature. IPR018336 Ribonuclease PH, conserved site 121 133 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.