Burkholderia cenocepacia J2315, BCAL0226 (rpoB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia cenocepacia J2315
GCF_000009485.1|latest
Locus Tag
BCAL0226
NCBI Locus TagQU43_RS37665
Name
rpoB
Replicon chromosome 1
Genomic location 259249 - 263355 (+ strand)

Cross-References

RefSeq WP_012492293.1
GI 206558633
Entrez 6934067
GI 206558633
INSDC CAR50537.1
NCBI Locus Tag QU43_RS37665
NCBI Old Locus Tag BCAL0226
RefSeq WP_012492293.1,GeneID
UniParc UPI00017B8FF5
UniProtKB Acc B4E5B2
UniProtKB ID RPOB_BURCJ
UniRef100 UniRef100_B4E5B2
UniRef50 UniRef50_O52271
UniRef90 UniRef90_A3MRU5

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA-directed RNA polymerase subunit beta
Synonyms
Evidence for Translation
Charge (pH 7) -26.03
Kyte-Doolittle Hydrophobicity Value -0.345
Molecular Weight (kDa) 153240.4
Isoelectric Point (pI) 5.38

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 667 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG000250 (653 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BCAL0226
Search term: rpoB

Human Homologs

Ensembl 86, assembly GRCh38.p7
RNA polymerase III subunit B [Source:HGNC Symbol;Acc:HGNC:30348]
E-value: 3.5e-26
Percent Identity: 30.2

References

No references are associated with this feature.