Burkholderia cenocepacia J2315, BCAS0728 (cdd)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009972 cytidine deamination
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01354
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008270 zinc ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01354
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004126 cytidine deaminase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01354
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF53927
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016787 hydrolase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00903
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG (InterPro) 00240 Pyrimidine metabolism InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG (InterPro) 00983 Drug metabolism - other enzymes InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc pyrimidine ribonucleosides salvage I InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc pyrimidine ribonucleosides salvage II InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc pyrimidine deoxyribonucleosides salvage InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc pyrimidine deoxyribonucleosides degradation InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG bcj00240 Pyrimidine metabolism 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bcj01100 Metabolic pathways 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IPR002125 Cytidine and deoxycytidylate deaminase domain 3 102 2.2E-15
TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase IPR006262 Cytidine deaminase, homotetrameric 4 127 1.0E-43
Gene3D G3DSA:3.40.140.10 1 129 2.5E-56
SUPERFAMILY SSF53927 IPR016193 Cytidine deaminase-like 1 127 3.01E-44
ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. IPR016192 APOBEC/CMP deaminase, zinc-binding 53 95 -
ProSiteProfiles PS51747 Cytidine and deoxycytidylate deaminases domain profile. IPR002125 Cytidine and deoxycytidylate deaminase domain 1 129 28.471
CDD cd01283 cytidine_deaminase 7 118 8.66188E-42

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.