Burkholderia cenocepacia J2315, BCAS0667
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | bcj03070 | Bacterial secretion system | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| TIGRFAM | TIGR01646 | vgr_GE: Rhs element Vgr protein | IPR006533 | Type VI secretion system, RhsGE-associated Vgr protein | 113 | 597 | 1.1E-111 |
| SUPERFAMILY | SSF69279 | 288 | 460 | 2.21E-27 | |||
| SUPERFAMILY | SSF69255 | 460 | 547 | 3.66E-27 | |||
| Gene3D | G3DSA:2.30.110.50 | 98 | 429 | 2.6E-93 | |||
| Gene3D | G3DSA:3.55.50.10 | 196 | 287 | 2.6E-93 | |||
| TIGRFAM | TIGR03361 | VI_Rhs_Vgr: type VI secretion system Vgr family protein | IPR017847 | Type VI secretion system, RhsGE-associated Vgr family subset | 95 | 611 | 1.5E-146 |
| Pfam | PF05954 | Phage late control gene D protein (GPD) | 114 | 429 | 1.8E-74 | ||
| Gene3D | G3DSA:2.40.50.230 | IPR037026 | Vgr protein, OB-fold domain superfamily | 451 | 552 | 1.7E-37 | |
| SUPERFAMILY | SSF53474 | IPR029058 | Alpha/Beta hydrolase fold | 758 | 939 | 3.71E-9 | |
| Gene3D | G3DSA:3.30.1920.30 | 320 | 385 | 2.6E-93 | |||
| SUPERFAMILY | SSF69279 | 95 | 282 | 4.14E-49 | |||
| SUPERFAMILY | SSF69349 | 537 | 714 | 7.77E-29 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.