Burkholderia cenocepacia J2315, BCAS0597
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF08220
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PF08220
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF46785 | IPR036390 | Winged helix DNA-binding domain superfamily | 6 | 43 | 3.74E-5 | |
| SMART | SM00420 | IPR001034 | DeoR-type HTH domain | 8 | 57 | 7.0E-5 | |
| SMART | SM01134 | 77 | 238 | 4.2E-61 | |||
| SUPERFAMILY | SSF100950 | IPR037171 | NagB/RpiA transferase-like | 79 | 239 | 9.84E-29 | |
| Pfam | PF00455 | DeoR C terminal sensor domain | IPR014036 | DeoR C-terminal sensor domain | 79 | 236 | 1.7E-46 |
| ProSiteProfiles | PS51000 | DeoR-type HTH domain profile. | IPR001034 | DeoR-type HTH domain | 5 | 65 | 13.523 |
| ProSitePatterns | PS00894 | DeoR-type HTH domain signature. | IPR018356 | Transcription regulator, HTH DeoR-type, conserved site | 8 | 42 | - |
| Pfam | PF08220 | DeoR-like helix-turn-helix domain | IPR001034 | DeoR-type HTH domain | 8 | 43 | 5.9E-10 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.