Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Molecular Function | GO:0043565 | sequence-specific DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:SM00342
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:SM00342
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:SM00342
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003677 | DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:SSF46689
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
Gene3D | G3DSA:1.10.10.60 | 287 | 396 | 8.5E-24 | |||
Gene3D | G3DSA:3.40.50.2300 | 108 | 283 | 3.9E-78 | |||
SMART | SM00342 | IPR018060 | DNA binding HTH domain, AraC-type | 307 | 390 | 3.8E-22 | |
SUPERFAMILY | SSF53822 | IPR028082 | Periplasmic binding protein-like I | 15 | 274 | 4.12E-34 | |
SUPERFAMILY | SSF46689 | IPR009057 | Homeobox-like domain superfamily | 344 | 392 | 1.08E-9 | |
Gene3D | G3DSA:3.40.50.2300 | 13 | 275 | 3.9E-78 | |||
CDD | cd01543 | PBP1_XylR | 12 | 283 | 1.00373E-109 | ||
ProSiteProfiles | PS01124 | Bacterial regulatory proteins, araC family DNA-binding domain profile. | IPR018060 | DNA binding HTH domain, AraC-type | 294 | 392 | 24.319 |
Pfam | PF12833 | Helix-turn-helix domain | IPR018060 | DNA binding HTH domain, AraC-type | 314 | 392 | 3.5E-17 |
Pfam | PF13377 | Periplasmic binding protein-like domain | 118 | 276 | 6.0E-33 | ||
SUPERFAMILY | SSF46689 | IPR009057 | Homeobox-like domain superfamily | 291 | 338 | 2.14E-5 |