Burkholderia cenocepacia J2315, BCAS0211
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0003824 | catalytic activity |
Inferred from Sequence Model
Term mapped from: InterPro:SSF50621
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | bcj01230 | Biosynthesis of amino acids | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | bcj01130 | Biosynthesis of antibiotics | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | bcj01100 | Metabolic pathways | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | bcj01120 | Microbial metabolism in diverse environments | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | bcj00300 | Lysine biosynthesis | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | bcj01110 | Biosynthesis of secondary metabolites | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.20.20.10 | IPR029066 | PLP-binding barrel | 32 | 266 | 7.8E-30 | |
| SUPERFAMILY | SSF51419 | IPR029066 | PLP-binding barrel | 32 | 274 | 4.3E-31 | |
| Gene3D | G3DSA:2.40.37.10 | IPR009006 | Alanine racemase/group IV decarboxylase, C-terminal | 267 | 390 | 1.1E-15 | |
| Pfam | PF02784 | Pyridoxal-dependent decarboxylase, pyridoxal binding domain | IPR022644 | Orn/DAP/Arg decarboxylase 2, N-terminal | 34 | 269 | 1.7E-8 |
| Pfam | PF00278 | Pyridoxal-dependent decarboxylase, C-terminal sheet domain | IPR022643 | Orn/DAP/Arg decarboxylase 2, C-terminal | 24 | 367 | 6.2E-13 |
| SUPERFAMILY | SSF50621 | IPR009006 | Alanine racemase/group IV decarboxylase, C-terminal | 251 | 387 | 3.35E-24 | |
| CDD | cd06810 | PLPDE_III_ODC_DapDC_like | 21 | 389 | 1.48645E-106 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.