Burkholderia cenocepacia J2315, BCAM2311

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0034220 ion transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00182
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF13609
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0009279 cell outer membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00182
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0009279 cell outer membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00182
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015288 porin activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF13609
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF13609
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00184
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015288 porin activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF13609
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0034220 ion transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00182
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00184
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj01501 beta-Lactam resistance 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00182 E.coli/Neisseria porin superfamily signature IPR001702 Porin, Gram-negative type 99 109 2.2E-6
SUPERFAMILY SSF56935 25 379 4.19E-81
CDD cd00342 gram_neg_porins IPR033900 Porin domain, Gram-negative type 26 379 1.06216E-94
PRINTS PR00184 Neisseria sp. porin signature IPR002299 Porin, Neisseria sp. type 57 82 6.3E-11
PRINTS PR00184 Neisseria sp. porin signature IPR002299 Porin, Neisseria sp. type 156 173 6.3E-11
PRINTS PR00182 E.coli/Neisseria porin superfamily signature IPR001702 Porin, Gram-negative type 325 342 2.2E-6
PRINTS PR00184 Neisseria sp. porin signature IPR002299 Porin, Neisseria sp. type 322 346 6.3E-11
PRINTS PR00182 E.coli/Neisseria porin superfamily signature IPR001702 Porin, Gram-negative type 157 168 2.2E-6
PRINTS PR00182 E.coli/Neisseria porin superfamily signature IPR001702 Porin, Gram-negative type 55 66 2.2E-6
Pfam PF13609 Gram-negative porin IPR033900 Porin domain, Gram-negative type 10 348 2.1E-45
PRINTS PR00182 E.coli/Neisseria porin superfamily signature IPR001702 Porin, Gram-negative type 185 197 2.2E-6

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.