Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Molecular Function | GO:0008134 | transcription factor binding |
Inferred from Sequence Model
Term mapped from: InterPro:PS50045
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0005524 | ATP binding |
Inferred from Sequence Model
Term mapped from: InterPro:PS50045
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PS50045
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0043565 | sequence-specific DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF02954
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003677 | DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:SSF46689
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
CDD | cd00009 | AAA | 176 | 341 | 6.18902E-24 | ||
SUPERFAMILY | SSF52540 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | 171 | 413 | 1.69E-67 | |
Gene3D | G3DSA:1.10.10.60 | 419 | 473 | 1.2E-11 | |||
SMART | SM00382 | IPR003593 | AAA+ ATPase domain | 191 | 334 | 6.8E-11 | |
SUPERFAMILY | SSF46689 | IPR009057 | Homeobox-like domain superfamily | 384 | 471 | 4.66E-9 | |
Pfam | PF02954 | Bacterial regulatory protein, Fis family | IPR002197 | DNA binding HTH domain, Fis-type | 429 | 464 | 3.6E-7 |
ProSitePatterns | PS00676 | Sigma-54 interaction domain ATP-binding region B signature. | IPR025943 | Sigma-54 interaction domain, ATP-binding site 2 | 257 | 272 | - |
Pfam | PF00158 | Sigma-54 interaction domain | IPR002078 | RNA polymerase sigma factor 54 interaction domain | 171 | 337 | 8.5E-70 |
ProSitePatterns | PS00688 | Sigma-54 interaction domain C-terminal part signature. | IPR025944 | Sigma-54 interaction domain, conserved site | 384 | 393 | - |
ProSiteProfiles | PS50045 | Sigma-54 interaction domain profile. | IPR002078 | RNA polymerase sigma factor 54 interaction domain | 171 | 400 | 61.581 |
Gene3D | G3DSA:3.40.50.300 | 162 | 341 | 3.7E-62 | |||
Gene3D | G3DSA:1.10.8.60 | 342 | 418 | 4.3E-19 |