Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 24 | 35 | 3.1E-6 |
CDD | cd08461 | PBP2_DntR_like_3 | 99 | 296 | 3.13905E-98 | ||
Gene3D | G3DSA:3.40.190.10 | 172 | 268 | 7.8E-63 | |||
ProSiteProfiles | PS50931 | LysR-type HTH domain profile. | IPR000847 | Transcription regulator HTH, LysR | 7 | 64 | 25.162 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 45 | 56 | 3.1E-6 |
Pfam | PF03466 | LysR substrate binding domain | IPR005119 | LysR, substrate-binding | 98 | 296 | 2.3E-29 |
Gene3D | G3DSA:3.40.190.10 | 91 | 293 | 7.8E-63 | |||
Gene3D | G3DSA:1.10.10.10 | IPR036388 | Winged helix-like DNA-binding domain superfamily | 1 | 88 | 1.6E-30 | |
SUPERFAMILY | SSF46785 | IPR036390 | Winged helix DNA-binding domain superfamily | 4 | 84 | 1.11E-18 | |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 35 | 45 | 3.1E-6 |
SUPERFAMILY | SSF53850 | 91 | 294 | 1.81E-42 | |||
Pfam | PF00126 | Bacterial regulatory helix-turn-helix protein, lysR family | IPR000847 | Transcription regulator HTH, LysR | 9 | 68 | 9.4E-16 |