Burkholderia cenocepacia J2315, BCAM0764

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00354	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003677	DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00354	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF13377	Periplasmic binding protein-like domain			169	333	2.6E-35
ProSitePatterns	PS00356	LacI-type HTH domain signature.			1	19	-
Gene3D	G3DSA:3.40.50.2300				160	290	1.1E-64
ProSiteProfiles	PS50932	LacI-type HTH domain profile.	IPR000843	LacI-type HTH domain	1	55	23.795
CDD	cd01392	HTH_LacI	IPR000843	LacI-type HTH domain	3	45	3.07973E-15
SUPERFAMILY	SSF47413		IPR010982	Lambda repressor-like, DNA-binding domain superfamily	1	46	2.44E-11
SUPERFAMILY	SSF53822		IPR028082	Periplasmic binding protein-like I	78	335	7.4E-64
Pfam	PF00356	Bacterial regulatory proteins, lacI family	IPR000843	LacI-type HTH domain	1	45	2.7E-16
SMART	SM00354		IPR000843	LacI-type HTH domain	1	71	6.9E-6
Gene3D	G3DSA:1.10.260.40				1	47	9.5E-16
Gene3D	G3DSA:3.40.50.2300				79	313	1.1E-64
CDD	cd06288	PBP1_sucrose_transcription_regulator			61	333	1.2774E-134

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.