Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF037354
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PF00158
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0008134 | transcription factor binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF00158
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0005524 | ATP binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF00158
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
ProSiteProfiles | PS50045 | Sigma-54 interaction domain profile. | IPR002078 | RNA polymerase sigma factor 54 interaction domain | 187 | 425 | 45.781 |
Pfam | PF00158 | Sigma-54 interaction domain | IPR002078 | RNA polymerase sigma factor 54 interaction domain | 189 | 355 | 4.3E-50 |
Gene3D | G3DSA:1.10.8.60 | 362 | 445 | 9.8E-7 | |||
SUPERFAMILY | SSF52540 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | 189 | 434 | 4.19E-51 | |
Coils | Coil | 538 | 538 | - | |||
Pfam | PF06956 | Regulator of RNA terminal phosphate cyclase | IPR009715 | Regulator of RNA terminal phosphate cyclase | 2 | 186 | 4.1E-84 |
Gene3D | G3DSA:3.40.50.300 | 173 | 361 | 2.0E-49 | |||
PIRSF | PIRSF037354 | IPR017183 | Sigma54-dependent transcriptional activator, RtcR | 1 | 533 | 2.8E-281 | |
SMART | SM00382 | IPR003593 | AAA+ ATPase domain | 208 | 354 | 2.8E-11 | |
CDD | cd00009 | AAA | 201 | 354 | 7.45418E-19 |