Burkholderia cenocepacia J2315, BCAM0287

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS51063
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS51063
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00027 Cyclic nucleotide-binding domain IPR000595 Cyclic nucleotide-binding domain 65 149 2.7E-13
Gene3D G3DSA:2.60.120.10 IPR014710 RmlC-like jelly roll fold 58 178 5.3E-39
ProSiteProfiles PS51063 Crp-type HTH domain profile. IPR012318 Crp-type HTH domain 179 252 24.911
PRINTS PR00034 CRP bacterial regulatory protein HTH signature IPR012318 Crp-type HTH domain 224 239 9.9E-11
ProSiteProfiles PS50042 cAMP/cGMP binding motif profile. IPR000595 Cyclic nucleotide-binding domain 45 115 8.255
Gene3D G3DSA:1.10.10.10 IPR036388 Winged helix-like DNA-binding domain superfamily 180 257 1.2E-24
SUPERFAMILY SSF51206 IPR018490 Cyclic nucleotide-binding-like 38 178 2.75E-28
CDD cd00038 CAP_ED IPR000595 Cyclic nucleotide-binding domain 48 159 7.53695E-19
SMART SM00100 IPR000595 Cyclic nucleotide-binding domain 45 166 4.3E-10
SUPERFAMILY SSF46785 IPR036390 Winged helix DNA-binding domain superfamily 180 257 6.48E-21
SMART SM00419 IPR012318 Crp-type HTH domain 202 250 2.0E-14
CDD cd00092 HTH_CRP 181 248 2.94721E-15
PRINTS PR00034 CRP bacterial regulatory protein HTH signature IPR012318 Crp-type HTH domain 208 224 9.9E-11
Pfam PF13545 Crp-like helix-turn-helix domain IPR012318 Crp-type HTH domain 183 257 2.4E-19

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.