Burkholderia cenocepacia J2315, BCAL2526a

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50937
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50937
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF46955 IPR009061 Putative DNA-binding domain superfamily 8 117 1.36E-24
PRINTS PR00040 MerR bacterial regulatory protein HTH signature IPR000551 MerR-type HTH domain 9 20 5.7E-5
SMART SM00422 IPR000551 MerR-type HTH domain 8 76 5.4E-15
MobiDBLite mobidb-lite consensus disorder prediction 1 22 -
ProSiteProfiles PS50937 MerR-type HTH domain profile. IPR000551 MerR-type HTH domain 7 75 24.041
Gene3D G3DSA:1.10.1660.10 1 121 1.1E-28
PRINTS PR00040 MerR bacterial regulatory protein HTH signature IPR000551 MerR-type HTH domain 20 33 5.7E-5
Pfam PF13411 MerR HTH family regulatory protein IPR000551 MerR-type HTH domain 8 70 9.8E-14
PRINTS PR00040 MerR bacterial regulatory protein HTH signature IPR000551 MerR-type HTH domain 43 63 5.7E-5
Coils Coil 89 121 -
CDD cd01282 HTH_MerR-like_sg3 8 117 1.33197E-40

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.