Burkholderia cenocepacia J2315, BCAL2395 (cafA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006396 RNA processing
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00757
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004540 ribonuclease activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00757
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003723 RNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF10150
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family IPR004659 Ribonuclease E/G 13 426 3.9E-156
SUPERFAMILY SSF50249 IPR012340 Nucleic acid-binding, OB-fold 39 126 4.54E-18
CDD cd04453 S1_RNase_E 38 126 5.77682E-36
Gene3D G3DSA:2.40.50.140 31 126 1.1E-28
Pfam PF10150 Ribonuclease E/G family IPR019307 RNA-binding protein AU-1/Ribonuclease E/G 122 393 3.6E-103
SMART SM00316 IPR022967 RNA-binding domain, S1 37 120 4.8E-6
Gene3D G3DSA:3.40.1260.20 402 488 1.6E-5

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.