Burkholderia cenocepacia J2315, BCAL2341 (nuoD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0048038 quinone binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00346
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016651 oxidoreductase activity, acting on NAD(P)H
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00535
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055114 oxidation-reduction process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00535
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0051287 NAD binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00346
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj01100 Metabolic pathways 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bcj00190 Oxidative phosphorylation 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site 43 54 -
Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit IPR001135 NADH-quinone oxidoreductase, subunit D 120 417 6.1E-124
SUPERFAMILY SSF56762 IPR029014 [NiFe]-hydrogenase, large subunit 16 417 9.55E-139
Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H 1 417 50.794
TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H 6 417 1.3E-188
Gene3D G3DSA:1.10.645.20 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily 4 417 6.3E-175

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.