Burkholderia cenocepacia J2315, BCAL2012

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0007165	signal transduction	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00388	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0000155	phosphorelay sensor kinase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00388	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0016310	phosphorylation	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00344	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0016021	integral component of membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00304	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0016772	transferase activity, transferring phosphorus-containing groups	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00344	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	bcj02020	Two-component system	73.0+/03-31, Mar 15	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	390	400	7.1E-10
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	372	386	7.1E-10
CDD	cd06225	HAMP	IPR003660	HAMP domain	183	230	0.00536333
CDD	cd00075	HATPase			336	443	8.01414E-26
Gene3D	G3DSA:3.30.450.300		IPR038421	Sensor histidine kinase RisS, periplasmic domain superfamily	33	158	1.7E-53
SMART	SM00387		IPR003594	Histidine kinase/HSP90-like ATPase	331	447	2.5E-28
ProSiteProfiles	PS50885	HAMP domain profile.	IPR003660	HAMP domain	181	233	7.683
SUPERFAMILY	SSF55874		IPR036890	Histidine kinase/HSP90-like ATPase superfamily	286	444	6.29E-32
SMART	SM00304		IPR003660	HAMP domain	181	233	0.0021
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	406	424	7.1E-10
Gene3D	G3DSA:3.30.565.10		IPR036890	Histidine kinase/HSP90-like ATPase superfamily	294	450	4.4E-31
Gene3D	G3DSA:1.10.287.130				179	289	8.1E-18
CDD	cd00082	HisKA	IPR003661	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain	232	289	7.45131E-8
ProSiteProfiles	PS50109	Histidine kinase domain profile.	IPR005467	Histidine kinase domain	241	447	39.244
Pfam	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	IPR003594	Histidine kinase/HSP90-like ATPase	332	444	2.3E-18
Pfam	PF00512	His Kinase A (phospho-acceptor) domain	IPR003661	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain	237	290	7.9E-7
Coils	Coil				214	234	-
Pfam	PF16524	Periplasmic domain of Sensor histidine kinase RisS	IPR032408	Sensor histidine kinase RisS, periplasmic domain	47	152	1.2E-40
SUPERFAMILY	SSF47384		IPR036097	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily	219	292	5.1E-12
SMART	SM00388		IPR003661	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain	234	293	5.3E-8

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.