Burkholderia cenocepacia J2315, BCAL1919 (clpB)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0009408	response to heat	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR03346	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0005737	cytoplasm	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR03346	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0019538	protein metabolic process	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF81923	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0005524	ATP binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PS00870	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0042026	protein refolding	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR03346	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:3.40.50.300				343	550	2.8E-68
Pfam	PF02861	Clp amino terminal domain, pathogenicity island component	IPR004176	Clp, N-terminal	17	68	6.9E-12
Gene3D	G3DSA:3.40.50.300				147	342	7.3E-76
Gene3D	G3DSA:1.10.1780.10		IPR036628	Clp, N-terminal domain superfamily	1	146	4.1E-34
Gene3D	G3DSA:3.40.50.300				555	769	1.3E-88
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	652	670	1.5E-41
Pfam	PF10431	C-terminal, D2-small domain, of ClpB protein	IPR019489	Clp ATPase, C-terminal	771	849	2.9E-24
SMART	SM00382		IPR003593	AAA+ ATPase domain	603	758	6.3E-10
Gene3D	G3DSA:1.10.8.60				771	864	3.5E-27
CDD	cd00009	AAA			577	768	4.60089E-21
SUPERFAMILY	SSF81923		IPR036628	Clp, N-terminal domain superfamily	4	156	1.08E-40
SUPERFAMILY	SSF52540		IPR027417	P-loop containing nucleoside triphosphate hydrolase	552	860	2.92E-83
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	607	625	1.5E-41
TIGRFAM	TIGR03346	chaperone_ClpB: ATP-dependent chaperone protein ClpB	IPR017730	Chaperonin ClpB	6	860	0.0
ProSitePatterns	PS00870	Chaperonins clpA/B signature 1.	IPR018368	ClpA/B, conserved site 1	294	306	-
Coils	Coil				412	461	-
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	714	728	1.5E-41
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	681	699	1.5E-41
SUPERFAMILY	SSF52540		IPR027417	P-loop containing nucleoside triphosphate hydrolase	159	550	8.36E-100
Coils	Coil				472	492	-
ProSitePatterns	PS00871	Chaperonins clpA/B signature 2.	IPR028299	ClpA/B, conserved site 2	637	655	-
Pfam	PF02861	Clp amino terminal domain, pathogenicity island component	IPR004176	Clp, N-terminal	94	145	1.5E-9
SMART	SM01086		IPR019489	Clp ATPase, C-terminal	771	860	1.5E-36
SMART	SM00382		IPR003593	AAA+ ATPase domain	198	343	1.6E-12
CDD	cd00009	AAA			181	341	7.84232E-23
Pfam	PF00004	ATPase family associated with various cellular activities (AAA)	IPR003959	ATPase, AAA-type, core	203	335	2.8E-14
Pfam	PF17871	AAA lid domain	IPR041546	ClpA/ClpB, AAA lid domain	342	442	3.8E-36
Coils	Coil				506	526	-
Pfam	PF07724	AAA domain (Cdc48 subfamily)	IPR003959	ATPase, AAA-type, core	602	764	8.3E-54

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.