Burkholderia cenocepacia J2315, BCAL1899 (dnaX)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006260 DNA replication
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF48019
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02397
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0009360 DNA polymerase III complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02397
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003887 DNA-directed DNA polymerase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF12169
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF48019
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj00230 Purine metabolism 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bcj03440 Homologous recombination 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bcj03430 Mismatch repair 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bcj00240 Pyrimidine metabolism 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bcj01100 Metabolic pathways 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bcj03030 DNA replication 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF52540 IPR027417 P-loop containing nucleoside triphosphate hydrolase 34 225 5.4E-56
TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau IPR012763 DNA polymerase III, subunit gamma/ tau 3 355 5.1E-127
CDD cd00009 AAA 19 170 4.75922E-13
CDD cd18137 HLD_clamp_pol_III_gamma_tau 178 242 7.58027E-25
SUPERFAMILY SSF48019 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal 244 361 1.87E-31
Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha IPR021029 DNA polymerase III, tau subunit, domain V 656 771 3.8E-10
Gene3D G3DSA:3.40.50.300 13 177 3.2E-103
Gene3D G3DSA:1.10.8.60 8 239 3.2E-103
MobiDBLite mobidb-lite consensus disorder prediction 401 519 -
Gene3D G3DSA:3.30.300.150 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily 646 756 5.6E-8
SMART SM00382 IPR003593 AAA+ ATPase domain 37 179 5.4E-7
Pfam PF13177 DNA polymerase III, delta subunit 20 178 1.1E-39
Gene3D G3DSA:1.20.272.10 242 362 3.5E-39
Pfam PF12169 DNA polymerase III subunits gamma and tau domain III IPR022754 DNA polymerase III, gamma subunit, domain III 232 358 2.1E-24
MobiDBLite mobidb-lite consensus disorder prediction 367 386 -
MobiDBLite mobidb-lite consensus disorder prediction 533 589 -
MobiDBLite mobidb-lite consensus disorder prediction 464 479 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.