Burkholderia cenocepacia J2315, BCAL1883 (hisS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00442
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF001549
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006427 histidyl-tRNA aminoacylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00442
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004821 histidine-tRNA ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00442
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj00970 Aminoacyl-tRNA biosynthesis 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF13393 Histidyl-tRNA synthetase IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain 16 318 1.1E-48
Pfam PF03129 Anticodon binding domain IPR004154 Anticodon-binding 336 434 1.8E-8
Hamap MF_00127 Histidine--tRNA ligase [hisS]. IPR015807 Histidine-tRNA ligase 9 435 32.147
Gene3D G3DSA:3.30.930.10 8 331 6.8E-130
SUPERFAMILY SSF55681 14 326 4.02E-98
PIRSF PIRSF001549 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit 7 437 2.2E-116
CDD cd00859 HisRS_anticodon IPR033656 Histidyl-anticodon-binding 333 434 5.24932E-24
TIGRFAM TIGR00442 hisS: histidine--tRNA ligase IPR015807 Histidine-tRNA ligase 14 410 5.6E-151
CDD cd00773 HisRS-like_core IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain 24 323 9.6077E-99
ProSiteProfiles PS50862 Aminoacyl-transfer RNA synthetases class-II family profile. IPR006195 Aminoacyl-tRNA synthetase, class II 1 325 20.293
Gene3D G3DSA:3.40.50.800 IPR036621 Anticodon-binding domain superfamily 332 432 4.8E-27
SUPERFAMILY SSF52954 333 435 1.51E-19

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.