Burkholderia cenocepacia J2315, BCAL1610

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0015276 ligand-gated ion channel activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00079
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00079
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj02010 ABC transporters 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00079 IPR001320 Ionotropic glutamate receptor 38 257 0.0031
Gene3D G3DSA:3.40.190.10 36 255 6.9E-71
ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. IPR018313 Solute-binding protein family 3, conserved site 61 74 -
SMART SM00062 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF 38 258 3.9E-81
Gene3D G3DSA:3.40.190.10 122 220 6.9E-71
CDD cd13712 PBP2_FliY 38 256 1.69671E-127
Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF 39 256 4.0E-67
SUPERFAMILY SSF53850 8 258 1.37E-72

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.