Burkholderia cenocepacia J2315, BCAL1554

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006396 RNA processing
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00588
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008173 RNA methyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00588
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008168 methyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00967
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003723 RNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00588
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00588 SpoU rRNA Methylase family IPR001537 tRNA/rRNA methyltransferase, SpoU type 97 237 3.4E-39
CDD cd18103 SpoU-like_RlmB 97 239 1.51734E-80
Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB 4 244 44.239
SUPERFAMILY SSF75217 IPR029028 Alpha/beta knot methyltransferases 87 246 2.88E-48
Gene3D G3DSA:3.30.1330.30 IPR029064 50S ribosomal protein L30e-like 1 77 1.4E-17
SMART SM00967 IPR013123 RNA 2-O ribose methyltransferase, substrate binding 6 82 9.3E-16
Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding IPR013123 RNA 2-O ribose methyltransferase, substrate binding 7 78 1.4E-15
SUPERFAMILY SSF55315 IPR029064 50S ribosomal protein L30e-like 3 78 2.83E-17
TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 IPR004441 RNA methyltransferase TrmH family 5 243 7.2E-74
Gene3D G3DSA:3.40.1280.10 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal 80 244 2.6E-58

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.