Burkholderia cenocepacia J2315, BCAL1505
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0042274 | ribosomal small subunit biogenesis |
Inferred from Sequence Model
Term mapped from: InterPro:MF_01077
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF74942 | IPR036847 | Ribosome maturation factor RimP, C-terminal domain superfamily | 74 | 147 | 3.53E-16 | |
| Gene3D | G3DSA:3.30.300.70 | IPR035956 | RimP, N-terminal domain superfamily | 1 | 70 | 7.2E-13 | |
| SUPERFAMILY | SSF75420 | IPR035956 | RimP, N-terminal domain superfamily | 2 | 73 | 5.49E-16 | |
| Pfam | PF17384 | RimP C-terminal SH3 domain | IPR028998 | Ribosome maturation factor RimP, C-terminal | 76 | 145 | 1.1E-19 |
| CDD | cd01734 | YlxS_C | IPR028998 | Ribosome maturation factor RimP, C-terminal | 71 | 145 | 3.30301E-24 |
| Pfam | PF02576 | RimP N-terminal domain | IPR028989 | Ribosome maturation factor RimP, N-terminal | 6 | 73 | 1.7E-17 |
| Hamap | MF_01077 | Ribosome maturation factor RimP [rimP]. | IPR003728 | Ribosome maturation factor RimP | 1 | 146 | 22.412 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.