Burkholderia cenocepacia J2315, BCAL1488

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50937
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50937
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.10.1660.10 13 87 4.2E-22
CDD cd04765 HTH_MlrA-like_sg2 19 106 4.38505E-43
SMART SM00422 IPR000551 MerR-type HTH domain 19 89 1.1E-7
SUPERFAMILY SSF46955 IPR009061 Putative DNA-binding domain superfamily 17 93 7.78E-19
Pfam PF13411 MerR HTH family regulatory protein IPR000551 MerR-type HTH domain 19 88 1.2E-22
ProSiteProfiles PS50937 MerR-type HTH domain profile. IPR000551 MerR-type HTH domain 18 88 17.985
MobiDBLite mobidb-lite consensus disorder prediction 83 112 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.